Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02391 ATGGAAAAAGTTGCAAAGCTAACAAAGCTTAAGTCAGTGCTCAAGAAATGGAACACCTTCACCTATTACAACAACAATAAGCACAACCGCTCCAACATCAGAGCGGTTGCAAACGAAGATGTTGACTCATGTGCGTTGTCAGGACAAGACCTTCGCCAAGTGTTTGTTGGAAAGACACGGCGACGTTACCTGGTTAACTCCGATGTTGTTGGACATCCGCTTTTCCGGGAGCTTGTGGACCGGTCACGCGACTCCACTGAGGTAAACAACgatgatgatgaggttaacGTGGCTTGCGAGGTTGTCCTATTCGAGCATATGTTGTGGATGCTCGAAAATTCCGATCCTCAACCGGAATCGCTTGATGAACTTGTCGATTATTACAGTTGCTAG 393 0.4478 MEKVAKLTKLKSVLKKWNTFTYYNNNKHNRSNIRAVANEDVDSCALSGQDLRQVFVGKTRRRYLVNSDVVGHPLFRELVDRSRDSTEVNNDDDEVNVACEVVLFEHMLWMLENSDPQPESLDELVDYYSC 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02391 130 Pfam Auxin responsive protein 10 111 IPR003676 GO:0009733
Tsu08g02391 130 PANTHER SMALL AUXIN-UP RNA-RELATED 4 130 - -
Tsu08g02391 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 130 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02391 Tsu-Chr8 35163183 35163575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02391 1 113 Calmodulin-binding Proteins AT3G43120 21.168 5.34e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02391 - - mtr:MTR_2g044020 220.32