Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02390 ATGGAATTCGGTGGAGGCTCAAAACTTACTGGGATTAGACAGATTGTGAGACTaaaagaattacttcaaaaatggcaaaatgtcaCATTTGGCCCGAAACCTCCGATTCCTAGACTTGAAGAAGCTGATGATGGTTCCAGATCACCAATAATCAACAAAAGGATAACGAATCTCCAAAGTTATGAATCTGATGAAGAAACCTGTCAAACTCCTGATCCTGAACCACCCCACGATGTCCCAAAAGGTTACTTGGCTGTCTATGTTGGACCCGAGCTTCGACGGTTCATTATTCCAACTAGCTACCTTAGCCATTCCTTATTCAAAATTATGCTTGAAAAGGCCGCTGAGGAATACGGATTTGATCAGAGCGGCGGACTCACGATACCATGTGAGATTGAGACCTTTAAATACCTCATCAAATGCATCGAAAACCAAGAGAAAGAACAACATGATGACTTCTCGTTTAGAAACTCAGAACCGGAACCCGAACCAGAAGAAACCTTGGAAGAGTAA 513 0.4055 MEFGGGSKLTGIRQIVRLKELLQKWQNVTFGPKPPIPRLEEADDGSRSPIINKRITNLQSYESDEETCQTPDPEPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKIMLEKAAEEYGFDQSGGLTIPCEIETFKYLIKCIENQEKEQHDDFSFRNSEPEPEPEETLEE 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02390 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 151 IPR003676 GO:0009733
Tsu08g02390 170 MobiDBLite consensus disorder prediction 61 80 - -
Tsu08g02390 170 MobiDBLite consensus disorder prediction 147 170 - -
Tsu08g02390 170 MobiDBLite consensus disorder prediction 147 162 - -
Tsu08g02390 170 PANTHER SMALL AUXIN-UP RNA-RELATED 7 151 - -
Tsu08g02390 170 Pfam Auxin responsive protein 60 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02390 Tsu-Chr8 35146084 35146838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02390 1 152 Calmodulin-binding Proteins AT5G20810 68.182 1.13e-72 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02390 K14488 - cpap:110808074 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04454 04 52345653 52346894 Tsu08g02390 08 35146084 35146838 PCT