Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02368 ATGCAAACCCTTCTCAAACTCACTACTCTCTTACTctacttcttcatcttcttcactttCTCAGCCTCCATCTCAGCCCATGATGAAGCTGAAGCCCAAGATCTAGTCCATTCCTCCTGCATTCACTCCAGATATCCAAAGTTATGTCTCAGAACACTCTCCAACTACACCGGGCCAGCTAAAAGCCCATTAGACATAGCTCAAGCAGCACTCCGGGTAAGCTTAGCCCACGCCAAAAGAGCTTCCAAATATCTTCTGTCTTCCAAAGGTGGGTCCCACAGTAGCAGCTTAAGTAGACGTCAGCAGGCTGATCTAAGTGACTGTAAAGAGCAGATTGCTGATTCAATTGATGAACTTCGTAAAAGTTTAGAGGAGTTGCGACATCTGCGACCGGAAACATTTCGGTGGCAGATGAGCAACGCCTTGACATGGGTAAGTGCCGCACTTACTGATGGCGACACTTGCCTTGATGGGAATGTGAGACCTGATGTGAAAAAAAGAGTTACTGATCTTGCTAGAGTAACTAGTAATGCTCTTTACATGATTAATCGTGTTGGAAATGGGAAGTTTAAGGGTCGTTTAGGATCTAAAAACTAA 597 0.4338 MQTLLKLTTLLLYFFIFFTFSASISAHDEAEAQDLVHSSCIHSRYPKLCLRTLSNYTGPAKSPLDIAQAALRVSLAHAKRASKYLLSSKGGSHSSSLSRRQQADLSDCKEQIADSIDELRKSLEELRHLRPETFRWQMSNALTWVSAALTDGDTCLDGNVRPDVKKRVTDLARVTSNALYMINRVGNGKFKGRLGSKN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02368 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 185 IPR035513 -
Tsu08g02368 198 PANTHER PECTINESTERASE INHIBITOR 3 9 187 - -
Tsu08g02368 198 Pfam Plant invertase/pectin methylesterase inhibitor 34 180 IPR006501 GO:0004857
Tsu08g02368 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 187 - -
Tsu08g02368 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 183 IPR006501 GO:0004857
Tsu08g02368 198 Coils Coil 109 129 - -
Tsu08g02368 198 CDD PMEI-like_3 38 184 - -
Tsu08g02368 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 185 IPR035513 -
Tsu08g02368 198 SMART PMEI_2 31 181 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02368 Tsu-Chr8 34494340 34495455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02368 35 198 Carbohydrate Esterase AT3G14310 30.055 2.47e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02368 - - gmx:100816686 224.557