Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02352 ATGATTTTTCAATTGAAGGAAAAATGGGCATGGACTTATGTTCGAAAAACATTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGTTTTAATGCTGATTTGAAAAAGCATTTGAAGTCAGATTTaaatttggtacaattttttaCACACTTTAAAAGGGCTGTCAATGGTAAACGTAACAATGAGTCAGAAGCCGAATATGACTCAAAACATAAGTTGCcgaaattgaaaatgaagaaggcTCGTATGCTCGTTCATGCCGGAGATGTTTACACTCCAAGAATTTTTGAGGAATTCCAAGAGGAATATGAAGAATATCAAAATTGCTGCATAAAGGATTTGCAAGGTGGTTTGTATGTTGTAACAAACTATGATAATGCAAAGGAGAGGATGGTAATCGGAAATCCTTTGGAACAAAAAGTCTCTTGTGATTGTCGTAAATTTGAGACACATGGTATCTTATGTTGTCATGCTTTGAAAGTTTTAGATGCCATGAATATTAAGTCAATTCCCGAGCACTACATACTAAAGCGATGGACAAGAGATGCAAGAGTGGGAAGTAACCAAGATTGGAAAGGGAGGCATGTTGAATTAGACATAAAAGCTCATTTCATGATGCGATACAATGAGTTATGTCCTCGAATGCTTAAATTGACCAACAAATCTTCAGAAACTCATGAAACTTACACATTTATGTCCAAAGTTTGTGAAGAGTCCGGCAAAATAATTGACGATATGTTGGCCAAAAAGCATGTGGATGGAGAATTAGATGGAGAGGTTCGTGTATCCATATCAATTGGAAANGTTGATAAATGGGTGAATAATGTACATGAACAAAATGTGCAACCTGACCAAGAAAATATTGTCAACATTGAACCTCATTTGAATATGAAATTTGAATCTGAAGCAGCAgcttatgaattttataatgAGTACAGTAAAAGAAAAGGATTTGGTATTCGTCgagaatattttaataaaagcaAAGTAGATGGAGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAGGGTAAACGAAGTGTTGACAAAAGACGTACAGGAGAACATAGAGCAGAAACTAGAACGGATTGTCAAGCACGTATGGTTATTTCACTTGATCGgaagataaataaatacaagGTTGTTGACTTTATTGCTCAACATAACCATCCACTTCAACCACCCGAGCATGTTCATATGATTCGCTCTCATCGGCACATATCTGAGGCACAAGAAACACAAATTATCTTGGGAGATGAATCTGGATTAAGACCAAAAGATTTGCATGAATATATATCCAGGCAAGCTGGTGGAATAGAGACCGTTGGTTTTACAAAAAAAGACCTTAAGAATTACCTTCAAACCAAAAGGAAGCAAACATTAAAGCATGGTGAAGTGGGTGCATTGATGATGTATTTCAAACAAGAAAGTGAAAATCCCTCGTTCTTTTATGACTTTCAAATGGATGATgaacaacaaataacaaatatattttgggcGGATGCACAAATGATAAATGATTATGAGTACTTCAGTGATGTCATCACTTTTGACACTACGTACAAGACAAACAAGGATTGTCGACCGTTGGGAGTATTTGTTGGACTCAATAATCACAGGCAAACAATCATTTTTGGGGCAGCATTGTTATATGATGAAACAATATCTTCTTTTCGGTGGTTATTTGAAACTTTTCTCAAAGCAATGCGTGGAGAAAAACCTAAAACCATTCTAACAGATCAAGATGCTGCAATGGCTAAGGCTATTTCTTTAGTTATGCCAGAAACATTTCATGGATTGTGCACTTGGCATATAAGACAAAACGCTCTAAGGCATGTGAATCATTTATATCAAAAGAGTTCGcaatttaatttggattttgAAGCATGCATAGATGTACATGAAGAGGAGGTTGAACTTTTGAATGCATGGAATTCTTTACTTGTTGAGCATAATGTTTCGGAAGATGGAGAGGTTCGTGTATCCATATCAATTGGAAAGGATGAAATTGATAATATGGAAACCGTTGGCATGACAAGAGGCATAAAGGCGCGACATTGTTTACGGAAAGcaGCAAACTACAATCCAAGAGAAGCAATGGAACTCTGCATCAAGCTACAGTCCACGCGACACAATCACACTAAGTTAACAATGGAACTCTGCATCAAGCTACAGTCCAAGCGGCGACATCAAACCAAGTTAACAATGAAACTCAGCATGAATTACAATCCAAATGACGCAATTTGA 2253 0.3475 MIFQLKEKWAWTYVRKTFTAGMRSTQLSESFNADLKKHLKSDLNLVQFFTHFKRAVNGKRNNESEAEYDSKHKLPKLKMKKARMLVHAGDVYTPRIFEEFQEEYEEYQNCCIKDLQGGLYVVTNYDNAKERMVIGNPLEQKVSCDCRKFETHGILCCHALKVLDAMNIKSIPEHYILKRWTRDARVGSNQDWKGRHVELDIKAHFMMRYNELCPRMLKLTNKSSETHETYTFMSKVCEESGKIIDDMLAKKHVDGELDGEVRVSISIGXVDKWVNNVHEQNVQPDQENIVNIEPHLNMKFESEAAAYEFYNEYSKRKGFGIRREYFNKSKVDGVLTSRRFTCFKEGKRSVDKRRTGEHRAETRTDCQARMVISLDRKINKYKVVDFIAQHNHPLQPPEHVHMIRSHRHISEAQETQIILGDESGLRPKDLHEYISRQAGGIETVGFTKKDLKNYLQTKRKQTLKHGEVGALMMYFKQESENPSFFYDFQMDDEQQITNIFWADAQMINDYEYFSDVITFDTTYKTNKDCRPLGVFVGLNNHRQTIIFGAALLYDETISSFRWLFETFLKAMRGEKPKTILTDQDAAMAKAISLVMPETFHGLCTWHIRQNALRHVNHLYQKSSQFNLDFEACIDVHEEEVELLNAWNSLLVEHNVSEDGEVRVSISIGKDEIDNMETVGMTRGIKARHCLRKAANYNPREAMELCIKLQSTRHNHTKLTMELCIKLQSKRRHQTKLTMKLSMNYNPNDAI 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02352 750 Pfam MULE transposase domain 516 610 IPR018289 -
Tsu08g02352 750 PANTHER OS03G0181600 PROTEIN 273 654 - -
Tsu08g02352 750 Pfam SWIM zinc finger 128 165 IPR007527 GO:0008270
Tsu08g02352 750 PANTHER OS03G0181600 PROTEIN 1 239 - -
Tsu08g02352 750 Pfam FAR1 DNA-binding domain 308 396 IPR004330 -
Tsu08g02352 750 ProSiteProfiles Zinc finger SWIM-type profile. 120 167 IPR007527 GO:0008270
Tsu08g02352 750 SMART 26again6 142 169 IPR006564 GO:0008270
Tsu08g02352 750 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 273 654 IPR031052 GO:0006355
Tsu08g02352 750 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 239 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02352 Tsu-Chr8 33899033 33902338 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu08g02352 MULE 4.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02352 - - cam:101500125 670.233