Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02315 ATGGCATCTGATTCAAACACGCTTCAGTCAATTCGCTACAACCGCGGTTCTCTTCAGCTTCTCGATCAGAGAAAGCTTCCTCTAGAAAGCGTTTACTTGGAAATTCGGGATTCAAATGATGGCTGGAATGCTATACAAGATATGGTGGTCCGGGGAGCACCTGCTATTGCTATTGCAGCGGCACTCTCACTGGCTGTGGAGGTATCCAATTTAGAAGATTTCAACGGGTCTACTGATGATGCTGTTTACTTCCTGCAGAAGAAGTTGGAATATCTTGTCTCGAGCCGGCCAACTGCGGTGAACTTATCAGATGCTGCGACAAAACTCAAAGAAATAATTTCTAAGGCTGCTGCTTCCACTTCAGAGGCCAAAGGTGTTTTTCAGGCTTATCTAGAGGCTGCTGAAATAATGCTTGAGGATGATGTTGCATCGAACAGAGCAATTGGAACATATGGAGCTAGTGTTATTCAAAACCAAAGAGAAAAACAGAATCTCTCTGTTTTGACCCATTGCAACACTGGAAGTTTAGCCACGGCTGGATACGGTACTGCCCTTGGTGTGATCCGTGCACTTCACAGCGGGGGAGTTTTAGAAAGGGCTTATTGCACAGAAACACGCCCATTCAATCAAGGATCCAGACTTACTGCGTATGAGTTGGTACATGATAAAATACCTGCAACTCTTATAGCAGATTCTGCTGCAGCTGCATTAATGCAAGCAGGACGTGTGGATGCTGTTGTTGTTGGCGCAGATCGTGTTGCATCAAACGGTGACACAGCCAACAAAATTGGAACCTATAGTGTTGCCTTATGTGCCAAGTTTCATAATGTGCCTTTTTATGTGGCCGCACCCTTGACTTCCATTGATTTATCactttcttctggacaacaaaTTGTCATTGAGGAGAGATCTCCCAAGGAATTGTTGAATACACGTGGAGGACTGGGAGAGCAGGTTGCTGCCTCAGGAATATCTGTGTGGAATCCGGCTTTTGATGTTACACCTGCAAATCTAATATCTGGGATCATCACTGAGAAGGGTGTTATTACAAAGACATCTGCTGGTGATGCTTTCGACATAAAAGCTTTTGTACAAAAAACGAGTTAA 1107 0.4372 MASDSNTLQSIRYNRGSLQLLDQRKLPLESVYLEIRDSNDGWNAIQDMVVRGAPAIAIAAALSLAVEVSNLEDFNGSTDDAVYFLQKKLEYLVSSRPTAVNLSDAATKLKEIISKAAASTSEAKGVFQAYLEAAEIMLEDDVASNRAIGTYGASVIQNQREKQNLSVLTHCNTGSLATAGYGTALGVIRALHSGGVLERAYCTETRPFNQGSRLTAYELVHDKIPATLIADSAAAALMQAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLSSGQQIVIEERSPKELLNTRGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKTSAGDAFDIKAFVQKTS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02315 368 Gene3D - 198 363 IPR042529 -
Tsu08g02315 368 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 6 365 - -
Tsu08g02315 368 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 351 IPR005251 -
Tsu08g02315 368 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 6 365 - -
Tsu08g02315 368 Pfam Initiation factor 2 subunit family 50 350 IPR000649 GO:0044237
Tsu08g02315 368 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 36 351 IPR011559 GO:0044249
Tsu08g02315 368 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 8 360 IPR005251 -
Tsu08g02315 368 Gene3D - 6 197 IPR027363 -
Tsu08g02315 368 SUPERFAMILY NagB/RpiA/CoA transferase-like 4 353 IPR037171 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02315 46 368 Eukaryotic Initiation Factors Gene Family AT2G05830 75.617 1.94e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02315 K08963 - gmx:100799311 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02315 08 32757056 32760851 Tsu08g02315 08 32757056 32760851 ECH