Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu08g02295 | ATGGGTTCTGTTTCCacctccttcttctctttccttCTCATTACACTCTTTTCACAATGCCAATCCTCACCGTTCAAAAAAACATACGTAGTTCACATGAAAGACCACGATAAGCCTACCGTATACCCAACCCATCACGATTGGTACTCTTCAACTCTCCAATCACTCTCCATTTCAACCGATTCCGACGACTCCGACTCCGATCCATTTCTCTATTCTTACACAACCGCTTATAACGGTTTCGCTGCATCACTTAATGACCAACAAGCCAAAACACTACTCCAAAACGATGCCGTTTTGGGAATTTACGAAGATACCCTTTACCATCTTCATACTACAAGAACACCACAGTTTCTTGGATTAGAAACTCAAACTGGTTTATGGGAAGGTCATAGAACTCAAGAGTTAGATCAAGCTTCACACGATGTTATCATTGGTGTACTTGACACTGGAGTATGGCCTGAATCGTTGAGTTTTAACGATGCTGGTTTGCCTCAGATTCCCACGCGCTGGCGTGGCGCATGTGAGAATGCACCTGATTTTAACTCTTCAGTTTGTAACAGAAAACTCATCGGAGCAAGAAGTTTCTCTAGAGGCTTTCACATGGCTTCTGGTTATGGAAAAGGTGATAAAGATAAAGAGATTGTTTCTCCTCGTGATAGTGACGGACATGGAACTCACACAGCGAGCACCGCCGCGGGATCTCACGTCGGGAATGCAAGTTTTCTCGGATACGCTACCGGAACAGCAAGAGGTATGGCTCCTCAAGCGCGTGTCGCGGCTTACAAAGTTTGTTGGACTGACGGTTGTTTTGCATCGGACATTCTCGCCGGAATGGATCGTGCTATTCAAGACGGTGTCGATGTGCTTTCACTTTCTCTCGGCGGTGGATCTGCTCCTTATTTTCACGACACAATCGCGATCGGAGCTTTCGCCGCGGTTGAGCGAGGAATCTTCGTTTCATGCTCAGCCGGAAACAGCGGACCGACTAAAGCTTCACTCGCTAATGTAGCGCCGTGGATTATGACGGTTGGAGCCGGAACTCTCGATCGAGATTTTCCGGCTTACGCGACGTTAGGTAATAAAAAACGGTTTTCGGGAGTTTCACTTTACAGTGGAAAAGGAATGGGAAATAAACCGGTTAGTTTGGTTTATTTCAAgggttcaaattcaaaccaatccGCTAGTATTTGTTTAGCCGGTTCACTTAAACCGGATTTAGTTCGTGGAAAAGTAGTTATATGCGATAGAGGAATCAACGCGCGCGTGGAGAAAGGTAAAGTTGTAAAAGAAGCCGGTGGAATTGGAATGATACTCGCGAACACCGTCGCGAGTGGGGAAGAGTTAGTGGCTGATAGTCACTTGTTACCGGCCGTGGCGGTGGGGAGATTAGTTGGCGATGAGATCAGAGAGTATGTATCGTCTGATCCTAATCCAACGGCTGTGCTTAGTTTTGGAGGAACTGTTTTGAACATTAGACCTTCACCTGTTGTAGCAGCGTTTAGTTCAAGAGGGCCTAATATGATAACAAAAGAGATTTTGAAACCTGATGTTATTGGGCCTGGTGTGAATATTTTGGCTGGTTGGTCAGAAGCTGTTGGGCCCTCTGGGTTGGTTGAAGATACTCGGAAAACTCAGTTCAATATTATGTCAGGCACTTCAATGTCTTGTCCACACATAAGTGGGTTAGCTGCACTACTGAAAGCAGCTCATCCAACTTGGAGTCCAAGTGCGATTAAATCAGCACTTATGACAACAGCTTATGTACACGACAATTCAAAGTCCCCACTTCGCGATGCTGCTGATAGATCCTTCTCAACTCCATGGGCTCATGGTGCTGGCCATGTCAATCCTCAAAAAGCACTTTCTCCTGGCCTTGTTTATGATGCATCAACAAGAGACTACATTACATTCTTGTGCTCCTTAAACTACAACCCTGAGCAAATTCAACTCATTGTTAAGCGACGTGGTGTCAATTGTACCAGGAAGTTCTCTAATCCTGGTCAATTGAATTACCCGTCTTTCTCAATCGTGTTTTCGAGCAAGAGGGTTGTGAGATATACACGCATCTTGACAAATGTTGGCGAGGCGGGTTCTATCTATAACGTGGTGGCTGACGGGCCATCTACGGTGGGGATAACAGTGAAGCCGAGTAGGCTTGTGTTTGAGAAAGTAGGCGAAAGAAAAAGGTACACGGTTACCTTTGTGTCTAAGAAAGGTGCTGGTGCAGTTAAGAATGAATTTGGTAGCATTCTATGGAGCAATGCACAACACCAAGTTAGAAGCCCAGTTGCTTTTGCTTGGACAGATTTGTGA | 2316 | 0.4469 | MGSVSTSFFSFLLITLFSQCQSSPFKKTYVVHMKDHDKPTVYPTHHDWYSSTLQSLSISTDSDDSDSDPFLYSYTTAYNGFAASLNDQQAKTLLQNDAVLGIYEDTLYHLHTTRTPQFLGLETQTGLWEGHRTQELDQASHDVIIGVLDTGVWPESLSFNDAGLPQIPTRWRGACENAPDFNSSVCNRKLIGARSFSRGFHMASGYGKGDKDKEIVSPRDSDGHGTHTASTAAGSHVGNASFLGYATGTARGMAPQARVAAYKVCWTDGCFASDILAGMDRAIQDGVDVLSLSLGGGSAPYFHDTIAIGAFAAVERGIFVSCSAGNSGPTKASLANVAPWIMTVGAGTLDRDFPAYATLGNKKRFSGVSLYSGKGMGNKPVSLVYFKGSNSNQSASICLAGSLKPDLVRGKVVICDRGINARVEKGKVVKEAGGIGMILANTVASGEELVADSHLLPAVAVGRLVGDEIREYVSSDPNPTAVLSFGGTVLNIRPSPVVAAFSSRGPNMITKEILKPDVIGPGVNILAGWSEAVGPSGLVEDTRKTQFNIMSGTSMSCPHISGLAALLKAAHPTWSPSAIKSALMTTAYVHDNSKSPLRDAADRSFSTPWAHGAGHVNPQKALSPGLVYDASTRDYITFLCSLNYNPEQIQLIVKRRGVNCTRKFSNPGQLNYPSFSIVFSSKRVVRYTRILTNVGEAGSIYNVVADGPSTVGITVKPSRLVFEKVGERKRYTVTFVSKKGAGAVKNEFGSILWSNAQHQVRSPVAFAWTDL | 771 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu08g02295 | 771 | CDD | PA_subtilisin_like | 356 | 481 | - | - | |
| Tsu08g02295 | 771 | Gene3D | Peptidase S8/S53 domain | 142 | 635 | IPR036852 | GO:0004252|GO:0006508 | |
| Tsu08g02295 | 771 | Pfam | Fibronectin type-III domain | 669 | 765 | IPR041469 | - | |
| Tsu08g02295 | 771 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 18 | 768 | IPR045051 | - | |
| Tsu08g02295 | 771 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 124 | 622 | - | - | |
| Tsu08g02295 | 771 | Gene3D | - | 350 | 490 | - | - | |
| Tsu08g02295 | 771 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 17 | 111 | IPR037045 | - | |
| Tsu08g02295 | 771 | MobiDBLite | consensus disorder prediction | 207 | 221 | - | - | |
| Tsu08g02295 | 771 | PANTHER | CUCUMISIN-RELATED | 18 | 768 | - | - | |
| Tsu08g02295 | 771 | Pfam | PA domain | 397 | 469 | IPR003137 | - | |
| Tsu08g02295 | 771 | Pfam | Subtilase family | 141 | 591 | IPR000209 | GO:0006508|GO:0008236 | |
| Tsu08g02295 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 551 | 567 | IPR015500 | - | |
| Tsu08g02295 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 220 | 233 | IPR015500 | - | |
| Tsu08g02295 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 140 | 159 | IPR015500 | - | |
| Tsu08g02295 | 771 | SUPERFAMILY | Protease propeptides/inhibitors | 27 | 110 | - | - | |
| Tsu08g02295 | 771 | CDD | Peptidases_S8_3 | 108 | 588 | IPR034197 | - | |
| Tsu08g02295 | 771 | Gene3D | - | 639 | 768 | - | - | |
| Tsu08g02295 | 771 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 552 | 562 | IPR023828 | - | |
| Tsu08g02295 | 771 | SUPERFAMILY | Subtilisin-like | 110 | 626 | IPR036852 | GO:0004252|GO:0006508 | |
| Tsu08g02295 | 771 | MobiDBLite | consensus disorder prediction | 207 | 232 | - | - | |
| Tsu08g02295 | 771 | Pfam | Peptidase inhibitor I9 | 28 | 111 | IPR010259 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu08g02295 | Tsu-Chr8 | 32118440 | 32121994 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tsu08g02295 | 11 | 768 | Subtilisin-like Serine Gene Family | AT2G05920 | 67.500 | 0.0 | 1045 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu08g02295 | - | - | gmx:100797543 | 1200.27 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu04g04475 | 04 | 52512739 | 52515552 | Tsu08g02295 | 08 | 32118440 | 32121994 | PCT |