Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02261 atgaaagTAATTCCGACTACTTCTGATACTGAGATTTCTGCACTTGAAAACAAAAATCTGGGAGGTATCACGCAAATAATTGGTCCGGTACTCGATGTAGATTTTCCGCCAGGAAAGATGCCCTATATTTACAATGCTCTGAGAGTTCAAGGTCGAGATAGTGTTGGCCAACAAATTAATGTAACTTGTAAAGTACAGCAATTATTAGGAAATAATCGAATTAGAGTTGTAGCTATGAGTGTTACGGATGGTCTAAAGAGAGGACTGGAAGTGGTTGACACGGGAGCTGCTCTAAGTGTTCCAGTTGGTGGAGCAAACCTAGGTCGAATTTTCAACGTGCTTGGAGAGCCTATTGATAATTTGGGTCCTGTAGATACTCGCACAACATCTCATATTCATAGATATGCGCCTGCCTTTGTACAGTTAGATACTAAATTATCCATTTTTGAAACTGGAATAAAAGTAGTCGATCTTTTAGCTCCTTATCGCCGCGGCGGAAAAATAGGACTTTTCGGGGGAGCTGGGTCAGTTCAATTACTTGACTGA 546 0.4048 MKVIPTTSDTEISALENKNLGGITQIIGPVLDVDFPPGKMPYIYNALRVQGRDSVGQQINVTCKVQQLLGNNRIRVVAMSVTDGLKRGLEVVDTGAALSVPVGGANLGRIFNVLGEPIDNLGPVDTRTTSHIHRYAPAFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGSVQLLD 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02261 181 Pfam ATP synthase alpha/beta family, beta-barrel domain 23 95 IPR004100 GO:0046034|GO:1902600
Tsu08g02261 181 PANTHER ATP SYNTHASE 1 176 - -
Tsu08g02261 181 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 176 - -
Tsu08g02261 181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 176 IPR027417 -
Tsu08g02261 181 Gene3D - 12 97 - -
Tsu08g02261 181 Gene3D - 98 178 IPR027417 -
Tsu08g02261 181 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 19 96 IPR036121 GO:0046034|GO:1902600
Tsu08g02261 181 CDD ATP-synt_F1_beta_N 19 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02261 Tsu-Chr8 31260840 31264241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02261 94 175 Primary Pumps ATPases(2) AT1G20260 36.585 1.13e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02261 K02112 - gmx:3989272 298.13