Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02247 ATGGAAGAACAAAAAAGCATGAAAGACAACAAAACGACAAAAAACGAGGTTGTTCTTAGAATTTCCAACAATGAAAAAAACAGAGATTTTGAACCTACCCAAGTTAGTGAAACAAGTTCAAATTCTCCTCAGTTCATTTCCAAGATGGGTTCATCTTCATCTCCAAAAGGGTCACATGCAGCAGAACTCATAGAGCTTGAAAATCTTAGAACCACAAGCACTTTTTTTGGTCGGTCAGAATTTTCAAAGCCAAAGTCAAGAATGGTGGAACCAACATTTCCAAAAGATTCAAAATTTGTTGAAGAAAAGACTCAAATGGAGAGTTCAAATTCTCCAAAAACACCTTTGATTGGTACTCCAagagaggttgaagaagaagatgatgatgatgaagaagtgTACAAGACTGCAGAAATTGAAGTGAGTAAGAGATCTGATAAAAAGAGGAAATTTTGTAGTTGGATTGAGTTGTTAgcatttgttttaattttagggtttttgattGCAAGCTTAGTGGTTCATAAAttgcaaaataaacaaatttggAGTTTAGAACTTTGGAAATGGTGTGTTCTTACATTGGTAATTATCTCTGGTAGATTAGTCACTAGTTGGTTTATCaatgttttagttttcttaattgAAAGAAACTTTTTGTTTAAGAAGAAAGTTTTGTACTTTGTTTATGGTGTTAGGAAAAGTGTTCAAGCTTTTGTATGGTTTAGTTTGGTTCTTTTGGTATGGAGTTTAATTTTCCACCAAGGTGTTAAGAGAACAAGAAAAGTTACTAGGATTCTTGAATACATCACAAGGGCACTTGCATCTTGTGTTATTTCAGTTGCTATATGGTTAACGAAAACATTGTTGATTAAGCTATTGTCTTCATATTTTCAGTCAACTAGATTTTTCGATAGGGTCCAAGAATCGATTTTTCATCAGTACATTCTTAGGACTCTTTCCGGTCCACCTTTGATGGAGATGGTTGAAACAGTAGGGAAGAGTTCGAGTAACGGCCGACTAAGTTTCAAGACTAATAAAAAGAAAGGGAAGAAGGAACAAGAACAAGTTATTGATGtagacaaacttaaaaaaatgaaacaaggGAAAGTTTCCGCTTGGACTATGAAAGGATTGATTAATGTTATAAGGAGTTCTGGTTTGTCGACAATCAGCTATACACCAGAGAGCATCTATGAAGAAGTTAGTGACAACAATATCAATGAAATTAGAAGTGAGTGGGAAGCGAAGGCGGCTGCGTATCGAATTTTCAGGAATGTTGCTAAGCCAGGAAGCAAGTACATTGATAAGGAAGACCTCTTGCGCTTCATGAAAATTGAAGAAGTGGAAAATTTGCTTCCGTTATTTGAAGGAGCGGTTGAGACTAGAAGAATTAAGAGGAAGTCTCTGAAGAACTGGCTGGTGAAAGTCTACCTAGAACGTCGATCACTTGTGCATTCGTTAAATGATACCAAAACAGCAGTTGATGAACTGAATAACCTTGCTTCTGCAATTGTTCTTGTTGTCGCCATTATTGTGTGGTTGCTTGTGATGGGATTCTTAACAACTCAAGTTCTTGTCTTTATTTCATCACAACTTTTACttgtggtgtttgtttttgGCAACACGGCTAAGACAACATTTGAAgctattatatttgtttttgtgatgCATCCGTTTGACGTTGGTGATCGATGTGTCATTGACGGTGTTCAGATGATTGTAGAAGAGATGAACATATTGACTACAATCTTTTTGAGATATGACAATGAAAAGATATTCTATCCAAATTCAGTTCTTGCAACCAAGCCAATCAGTAACTTCTACCGGAGTCCAGAAATGAGTGATTCAGTTGAATTTGCTGTTGATGTTTCTACTTCAATTGAAAGTATTGGAGCCTTAAAGTCTAGATTAAAAgtaTACTTGGAAAGTAGGCCTCAGCATTGGCGTCCGAACCACAATGTAGTGGTTAAGGATATTGAGAATGTAAACAAGATGAAAATAGGTTTATATGTTACTCACACCATAAACTTCCAGAATTATACAGATAAGAACATAAGAAGATCTGAATTAGTTCTGGAGTTAAagaaaatccttgaagatcTTGATATTAAATATCATCTGCTGCCACAAGAAGTACTTCTTAATCATGTAAGTTCACAAGACCATAAGGCacaaaaaggttaa 2184 0.3265 MEEQKSMKDNKTTKNEVVLRISNNEKNRDFEPTQVSETSSNSPQFISKMGSSSSPKGSHAAELIELENLRTTSTFFGRSEFSKPKSRMVEPTFPKDSKFVEEKTQMESSNSPKTPLIGTPREVEEEDDDDEEVYKTAEIEVSKRSDKKRKFCSWIELLAFVLILGFLIASLVVHKLQNKQIWSLELWKWCVLTLVIISGRLVTSWFINVLVFLIERNFLFKKKVLYFVYGVRKSVQAFVWFSLVLLVWSLIFHQGVKRTRKVTRILEYITRALASCVISVAIWLTKTLLIKLLSSYFQSTRFFDRVQESIFHQYILRTLSGPPLMEMVETVGKSSSNGRLSFKTNKKKGKKEQEQVIDVDKLKKMKQGKVSAWTMKGLINVIRSSGLSTISYTPESIYEEVSDNNINEIRSEWEAKAAAYRIFRNVAKPGSKYIDKEDLLRFMKIEEVENLLPLFEGAVETRRIKRKSLKNWLVKVYLERRSLVHSLNDTKTAVDELNNLASAIVLVVAIIVWLLVMGFLTTQVLVFISSQLLLVVFVFGNTAKTTFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTIFLRYDNEKIFYPNSVLATKPISNFYRSPEMSDSVEFAVDVSTSIESIGALKSRLKVYLESRPQHWRPNHNVVVKDIENVNKMKIGLYVTHTINFQNYTDKNIRRSELVLELKKILEDLDIKYHLLPQEVLLNHVSSQDHKAQKG 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02247 727 MobiDBLite consensus disorder prediction 100 127 - -
Tsu08g02247 727 PIRSF Memb_At2g17000 1 726 IPR016688 -
Tsu08g02247 727 SUPERFAMILY Sm-like ribonucleoproteins 547 607 IPR010920 -
Tsu08g02247 727 MobiDBLite consensus disorder prediction 33 58 - -
Tsu08g02247 727 MobiDBLite consensus disorder prediction 1 32 - -
Tsu08g02247 727 MobiDBLite consensus disorder prediction 1 59 - -
Tsu08g02247 727 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 10 718 IPR016688 -
Tsu08g02247 727 Gene3D - 558 607 IPR023408 -
Tsu08g02247 727 Pfam Mechanosensitive ion channel 499 704 IPR006685 GO:0016020|GO:0055085
Tsu08g02247 727 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 10 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02247 Tsu-Chr8 30951586 30957033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02247 1 714 Mechanosensitive Ion Channel Family AT5G12080 49.118 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02247 K22048 - gmx:100777332 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02247 08 30951586 30957033 Tsu08g02247 08 30951586 30957033 ECH