Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02231 ATGCCTAAAACCCTCTTTGAAATAGTGACTGACCTTTGTGCAAAAACGGAAGATGCTCAAACCAAAGCAAGAATCGAAGAAATAGTTCTTAAGATCCTCCACAAATCAAACATTGAAGAGGTTACAAAAAGGAGAAAGATAACCATTCAATATTTCAAAGGGAGAAGGTATGTCTTCATTCGGGAGTTTTACACCAAGGATGACAAGGAACTTCCTTCatataaagGTTCTGACGTTGAATTTTGCATTGAAGCTGAAAAAAATAATCGATTTTCGTCCAACAGCTCAGATTGA 294 0.3605 MPKTLFEIVTDLCAKTEDAQTKARIEEIVLKILHKSNIEEVTKRRKITIQYFKGRRYVFIREFYTKDDKELPSYKGSDVEFCIEAEKNNRFSSNSSD 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02231 97 SUPERFAMILY ssDNA-binding transcriptional regulator domain 40 77 IPR009044 GO:0003677|GO:0006355
Tsu08g02231 97 Pfam Transcriptional Coactivator p15 (PC4) 42 76 IPR003173 GO:0003677|GO:0006355
Tsu08g02231 97 Gene3D Transcriptional Coactivator Pc4; Chain A 33 89 IPR009044 GO:0003677|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Tsu08g02231 PC4 3.6e-10 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02231 - K25815 psom:113340302 51.6026