Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02187 ATGTATGAAGTTATACAAAATTTGAAGTATTGCAGGGTTCCCTTCAACATGTCAGTTATGTCAACAATACTTGCACTGTTGCTATTAGTGAACCTTGGAAATGGTCTCAGTGACACATCCATTTCATGCCCCTTCAAGCTCAATTGTACACATAACATGAAGATTCTTGAACTTCCTACTCATCCAGTCCCGGTAAAACTGATCATCACGGACATTGACTATCGATTCCATTGGATATATCTATCTGATCCGGGAAAATGTTTACCGCGACTCTTACTTGACCACAACCTTTCATCAGtatttcctttttcttatgACTCCAAATTTTCTGAACCTACCAATATTAGTTTCTTCAATTGTTCTTCAGTACAACATCTCAGAAGCAATTATCAAGTTGACGATGGTGCACAAGATATGATATCTTGTCCAATTTTTGTTGCAGATTCGGATAACCAAAATATTGTTGAATCTGACTTAGTATATTGCGTCAAACTGTTTGATCGAGTTTCTTCATTCGACGCATATAGTATTCAATCAAACCTTCTCTCATGGACATGGTATGGAACAAATTTTGACATAGAATGCTTGAGATGTGAACATAAATCAAAGAAGAAGATTACATTCATTATTTTATCATCTGCAGGTGTAATCATCGGTTCAACTTTGCTAGTGCTTGTGATCGGTGCTATTGTTCGAATTCATCGTTATTTCAAGATGGAAGGCGAAGATCATGAAAGAATTGAAAACTTTTTGAAAGATTATAGGGCTTTAAAGCCAACCAGATTTTCCTACGCAGACATAAAGAGAACCACAAATAAATTTAAGGAAAAGCTAGGTGAAGGAGCTCATGGAGTTGTTTACAAAGGTAAGTTATCGAGCCAAATTCTGGTTGCTGTGAAGATGCTCAATAACACAGAGGGAGATGGGAATGAGTTCATAAATGAAGTAGGAACTATGGGCAAAATCCATCATCTCAATGTTGTTCGTTTGCTTGGCTTCTGCGCTGATGGATTCCACCGTGCTTTAGTTTATGACTTTTTTCCAAACGGTTCGTTGCAAACATTCATTTCACCTCCGAGCAACAAAGATAGTTTCCTTGGATGGGAGAAATTACAACAAATTGCTTTAGGCATAGCGAATGGAATTGAGTATCTTCATCAGGGTTGTGATCAAACAATTCTCCACTTTGACATCAATCCTCATAATGTCTTGATAGATGACAGTTTCAACCCGAAAATTACAGACTTCGGTTTGGCTAAGATGTGCATGAAAAATCAAAGTGTTGTATCAATGACTGCAGCCAGAGGAACAATAGGATACATGGCACCTGAAGTTTTTTCTAGAAATTTTGGGAATGTGTCTTATAAATCTGATATATATAGTTATGGTATGTTGTTATTGGAGATGGTTGGAGGAAGAAAGAATACAAACACATCAACAAGTGAAGAAGATTTTCAAGTTCTATATCCAGATTGGATCCACAAATTGCTTGAAGGAGGAGACATACAAATCCCTATAGATGAAGAGGGAGActttaaaattgcaaaaaagaTGGCAATTGTGGGACTTTGGTGCATTCAGTGGCAACCTATGCATCGTCCATCTATGAAAACTGTGTTGCAAATGCTACAAGGAGAGGGAGACAAGTTAAAAGTTCCATCCAATCCTTTTGGGCCTACAAATTCAACTAATAAAACTTCTAGTAGTACTGCAGCAAAACGTATGAATTTGGAGCTGGAAGTGATTCAAGAATTAGATTAG 1761 0.3663 MYEVIQNLKYCRVPFNMSVMSTILALLLLVNLGNGLSDTSISCPFKLNCTHNMKILELPTHPVPVKLIITDIDYRFHWIYLSDPGKCLPRLLLDHNLSSVFPFSYDSKFSEPTNISFFNCSSVQHLRSNYQVDDGAQDMISCPIFVADSDNQNIVESDLVYCVKLFDRVSSFDAYSIQSNLLSWTWYGTNFDIECLRCEHKSKKKITFIILSSAGVIIGSTLLVLVIGAIVRIHRYFKMEGEDHERIENFLKDYRALKPTRFSYADIKRTTNKFKEKLGEGAHGVVYKGKLSSQILVAVKMLNNTEGDGNEFINEVGTMGKIHHLNVVRLLGFCADGFHRALVYDFFPNGSLQTFISPPSNKDSFLGWEKLQQIALGIANGIEYLHQGCDQTILHFDINPHNVLIDDSFNPKITDFGLAKMCMKNQSVVSMTAARGTIGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNTSTSEEDFQVLYPDWIHKLLEGGDIQIPIDEEGDFKIAKKMAIVGLWCIQWQPMHRPSMKTVLQMLQGEGDKLKVPSNPFGPTNSTNKTSSSTAAKRMNLELEVIQELD 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02187 586 MobiDBLite consensus disorder prediction 555 571 - -
Tsu08g02187 586 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 31 585 - -
Tsu08g02187 586 PANTHER RUST RESISTANCE KINASE LR10-RELATED 31 585 IPR045874 GO:0004672
Tsu08g02187 586 Pfam Protein kinase domain 274 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02187 586 ProSiteProfiles Protein kinase domain profile. 272 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02187 586 SUPERFAMILY Protein kinase-like (PK-like) 254 543 IPR011009 -
Tsu08g02187 586 Gene3D Phosphorylase Kinase; domain 1 246 346 - -
Tsu08g02187 586 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Tsu08g02187 586 MobiDBLite consensus disorder prediction 551 571 - -
Tsu08g02187 586 Gene3D Transferase(Phosphotransferase) domain 1 347 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02187 Tsu-Chr8 29699364 29701280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02187 210 556 Receptor kinase-like Gene Family AT1G66910 45.658 2.48e-103 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu08g02187 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02187 - - adu:110273083 647.121