Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02185 ATGGGAAAGAAGGGTTGGTTTAGCATTGTAAAGAAGCTCTTTACAAGGGACACACATTCCACACAAGACAAGaaagagaaaagaagaaagtggGTATTTGGGAGGCTAAAAAACAAGAGATTTCCTTCAATTGAAGCACCACCACCATTGAAAGGAACAAGTTTATTTGAATCTGAAGAAGAACACAGTAAGCATGCTTTAACAGTTGCTACTGCTGCAGCTGAAGCTGCTCTTACAGCTGCTCAGGTTGCAGTTGAGGTTGTTAGGCTCCAATCTGCTCATCAATTTAAGCGAAAACTAGAAGTTAGAACTAACTGCAAGTGGAAGATTGAAGAATCTTCAGccatcaaaattcaaacaacATTTAGAGGTTACCTTGCAAGGAAAGCTTTGAGGGCATTGAAGGGAATAGTGATGCTTCAATCTATCATTCGTGGCAGAGCTGTAAGACGGCAAGCTATGAGTACTCTCAAATGCTTGCAGTCCATTGTGAGTATCCAGTCTCAGGTCATTGCAAGGAAACTCCAAATGGTTGAAGGAAGGTTTGGTTGTGGTGAATATGAAGAGATGCAAGGTTCAAGCGACAAGATCATAAGGATGGACTCAAACAGTGAGAGAAAGTGGGATAAAGAAGTGAATTACCCTAGCATGAGCAACAAAGAAGCTTCTCTTAGGAAAGAAAGAGTAAAAGAATACTCATATCACCATAGAAAATCAACTGAATcggaaagaaacaaaataaatggaAGAGGGAGGTATTGGATGGACACACAACATTGTAAGAGTAAAGAACTTGAAGATCTAGACTCGGTTTTCAGCTCACATTGTAGAGTTGTGGAAGATTGTGAAAGTAGACAACAAAAGCTTATACATATTCAGAGACAAAATGAAGTTGAAGGGTTAGATTCTCGGCCAATACTATCTTCAAAAAACTCTTTGCCCCAAAGGAGCCATAATTTAGAAGGAGAATATCACTCATTTCCGAGCTCTCCTGCAATTCCGACATACATGGTTGCAACGAAATCAACACAAGCAAAAGTAAGATCAACAAGTACACCAAAAACAAGGATAGTAAGGAATTAG 1083 0.3749 MGKKGWFSIVKKLFTRDTHSTQDKKEKRRKWVFGRLKNKRFPSIEAPPPLKGTSLFESEEEHSKHALTVATAAAEAALTAAQVAVEVVRLQSAHQFKRKLEVRTNCKWKIEESSAIKIQTTFRGYLARKALRALKGIVMLQSIIRGRAVRRQAMSTLKCLQSIVSIQSQVIARKLQMVEGRFGCGEYEEMQGSSDKIIRMDSNSERKWDKEVNYPSMSNKEASLRKERVKEYSYHHRKSTESERNKINGRGRYWMDTQHCKSKELEDLDSVFSSHCRVVEDCESRQQKLIHIQRQNEVEGLDSRPILSSKNSLPQRSHNLEGEYHSFPSSPAIPTYMVATKSTQAKVRSTSTPKTRIVRN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02185 360 Gene3D - 111 162 - -
Tsu08g02185 360 PANTHER IQ-DOMAIN 5-RELATED 1 358 - -
Tsu08g02185 360 MobiDBLite consensus disorder prediction 302 327 - -
Tsu08g02185 360 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Tsu08g02185 360 ProSiteProfiles IQ motif profile. 111 135 IPR000048 GO:0005515
Tsu08g02185 360 PANTHER IQ-DOMAIN 11 1 358 - -
Tsu08g02185 360 Pfam Protein of unknown function (DUF4005) 322 356 IPR025064 -
Tsu08g02185 360 SMART iq_5 110 132 IPR000048 GO:0005515
Tsu08g02185 360 SMART iq_5 133 154 IPR000048 GO:0005515
Tsu08g02185 360 MobiDBLite consensus disorder prediction 305 324 - -
Tsu08g02185 360 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02185 Tsu-Chr8 29682506 29684688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02185 3 356 IQD Protein Family AT5G13460 40.933 2.46e-71 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02185 - - gmx:100794802 424.861