Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02175 ATGGGAGACAGTGACGTTGAAGGCGGTGCTGCCGGAGATGACGGTTTTCATTCTCCGATCGGCCGTAAATATCGTCCGGTGTTGGCTAACGATCGCGCTGTTCTTGAAATGTCTTCGATAGATCCAGGATCTTCTTCTTCCGCTTCTTCTTCTGTTTTTCCAGATCAACCTCCTAATCTCAGaaaaataaatgtaagtAAGAGTGCGAGTACAGATGCTAAAGATGGGAATTCTCTTCATCAACCTCAACCTAATGGACCCCAGCAGGAATCTAAACTGGAACTCTTCGGTTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACAGGTGAGCAAATCGCACCGCCATCTAGTCCTAGAGATGGTGAGGATATTACAATTACTGCTGGGCTGCCAAAGcCTGATGCTCCCAAACTAGGTACAATGATGGGTGTATTCATTCCATGTGTTCAGAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTGGGCATGGCTGGCATAGGAGAGACATTGGTTCTTGTTGCTATGTGTGGTACTTGTACATTCCTTACTTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGCGGCGGACCATACTATCTAATAGGTCGTGCCCTTGGTCCAGAAGTTGGTGTTAGTATTGGTTTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCTCTGTATGTATTGGGAGCTGTAGAAACGTTTTTGAAAGCAGTTCCTTCTGCTGGGATTTTTAGAGAGACTATCACGCAAGTTAATGGTACTGCAATTGCACAACCGATAGAGAGTCCAAGTTCACATGACCTGCAAATTTATGGGATTGTTGTGACTATTGTGTTATGCTTTATTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCACCTGCATTTCTCATACCTGTTTTATTCTCACTCATCTGCATATATTTGGGAATTCTCTTGGCAAAGGAGGATCATCCCGCAGAGGGAGTTACTGGGTTGAGTATGAAGACTATTAAAGAAAATTGGAGTTCAGATTACCAAAAGACTAATGATGCTGGAATTCCAGAACCTGATGGTTCTGTAACCTGGGATTTCAATTCTTTGGTGGGCCTCTTTTTCCCAGCAGTGACAGGAATAATGGCAGGTTCTAACCGATCATCTTCTCTGAGAGATACTCAACGATCTATTCCTGTTGGAACTTTATCTGCAACTCTTGTAACTTCTTGTATGTATCTTATTTCTGTGGTAATGTTTGGCGCCATTGCCACCAGAGAGAAGCTTTTAACTGACAGGTTGCTTACAGCTACAGTTGCCTGGCCTTTTccttcattaattaaaattggGATTATTCTTTCAACCATGGGTGCTGCTCTTCAGAGCCTGACCGGTGCCCCACGTCTGCTTGCAGCTATAGCCAATGATGATATTTTACCTATTCTGAACTACTTTAAAGTTGCAGATGGCAGTGAGCCACATGTTGCTACCCTTTTTACTGCTTTCCTATGTATTGGGTGTGTCATCATTGGGAATCTTGATCTTATCACTCCAACTGTGACCATGTTTTTTCTTCTGTGTTATTCTGGTGTCAACTTATCCTGCTTCCTTCTCGATCTACTAGATGCTCCTAGTTGGCGTCCTCGGTGGAAATTTCATCATTGGAGTTTGTCGCTTCTAGGAGCATTACTTTGCATAGTGATCATGTTCCTAATCTCTTGGTCATTCACCGTGGTTTCTTTGGCCCTTGCAAGCCTTATATACAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCTTATTTCCAACTTGCACTTCGTAGCCTTCGGTCGCTAGGAGCAAATCAAGTGCACCCAAAGAATTGGTATCCAATTCCGCTTGTATTTTGTCGACCCTGGGGCAAACTGCCAGAAAATGTTCCCTGTCATCCAAAACTTGCAGACTTCGCTAACTGTATGAAGAAGAAAGGTCGTGGAATGACCATATTTGTCTCTATACTAGACGGGGATTACCATGAATGTGCTGAAGAGGCCAAGACAGCTTGTAAACAACTTAGTACCTACATTGAGTACAAAAATTGTGAAGGTGTGGCCGAGATTGTTGTAGCTCCTAACATGTCTGATGGTTTTCGTGGCATCGTTCAGACAATGGGCCTCGGTAATCTTAAGCCGAACATTGTGGTGATGCGTTATCCAGAAATCTGGCGCCGGGAGAACTTAACAGATATCCCTGCCACCTTTGTTGGTATAATTAATGACTGCATTGTTGCAAACAAGGCAGTAGTTATAGTGAAAGGTCTGGATGAATGGCCAAATGTGTACCAGAAGCAATACGGTACAATTGATTTGTATTGGATTGTAAGAGATGGCGGTCTCATGCTACTTCTCTCTCAATTGCTTCTTACCAAAGAGAGCTTTGAGAGTTGTAAGATTCAGGTTTTCTGTATTGCAGAAGACGATGCAGATGCAGAGGGTCTAAAAGCTGATGTTAAAAAATTCCTTTACGATCTTCGGATGCAGGCAGAAGTCTTTGTCATAACAATGAAATGGGAAGAACAAGCAGATAGCGGGTCTCCGCAAGATGAGTCATTAGACGCATTTACTAGTGCCAATCAAAGAATTGTTGATTATTTAACCCAAATGAAGGCAAGAGCAGAGAGAGAAGGTACCCCTCTTATGGCAGATGGTAAGACCGTGGTTGTGAACGAGAAGCAAGTCGAGAAGTTTTTATACACAACGCTTAAGCTGAATTCCATAATTTTGAGATACTCGAGAATGGCTGCTGTTGTGTTAGTAAGTCTTCCTCCCCCTCCATTGTGCCACCCAGCATATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAATATACCAAGGATTTTGATTGTAAGAGGATATCGTAGAGATGTTGTAACTCTATTCACATAG 2964 0.4258 MGDSDVEGGAAGDDGFHSPIGRKYRPVLANDRAVLEMSSIDPGSSSSASSSVFPDQPPNLRKINVSKSASTDAKDGNSLHQPQPNGPQQESKLELFGFDSLVNILGLKSMTGEQIAPPSSPRDGEDITITAGLPKPDAPKLGTMMGVFIPCVQSILGIIYYIRFSWIVGMAGIGETLVLVAMCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAIAQPIESPSSHDLQIYGIVVTIVLCFIVFGGVKMINRVAPAFLIPVLFSLICIYLGILLAKEDHPAEGVTGLSMKTIKENWSSDYQKTNDAGIPEPDGSVTWDFNSLVGLFFPAVTGIMAGSNRSSSLRDTQRSIPVGTLSATLVTSCMYLISVVMFGAIATREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGALLCIVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMTIFVSILDGDYHECAEEAKTACKQLSTYIEYKNCEGVAEIVVAPNMSDGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTDIPATFVGIINDCIVANKAVVIVKGLDEWPNVYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEDDADAEGLKADVKKFLYDLRMQAEVFVITMKWEEQADSGSPQDESLDAFTSANQRIVDYLTQMKARAEREGTPLMADGKTVVVNEKQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPLCHPAYFYMEYMDLLLENIPRILIVRGYRRDVVTLFT 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02175 987 Pfam Amino acid permease 146 622 IPR004841 GO:0016020|GO:0055085
Tsu08g02175 987 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 15 986 - -
Tsu08g02175 987 MobiDBLite consensus disorder prediction 39 90 - -
Tsu08g02175 987 Pfam Solute carrier family 12 788 986 IPR018491 GO:0006811|GO:0016020|GO:0022857
Tsu08g02175 987 Pfam Solute carrier family 12 656 777 IPR018491 GO:0006811|GO:0016020|GO:0022857
Tsu08g02175 987 Gene3D Amino acid/polyamine transporter I 139 604 - -
Tsu08g02175 987 MobiDBLite consensus disorder prediction 112 132 - -
Tsu08g02175 987 TIGRFAM 2a30: K-Cl cotransporter 77 987 IPR004842 GO:0006811|GO:0015377|GO:0016021
Tsu08g02175 987 MobiDBLite consensus disorder prediction 1 23 - -
Tsu08g02175 987 MobiDBLite consensus disorder prediction 38 90 - -
Tsu08g02175 987 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 15 986 IPR004842 GO:0006811|GO:0015377|GO:0016021
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02175 141 987 Inorganic Solute Cotransporters AT1G30450 83.019 0.0 1456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02175 K14427 - gmx:100795205 1736.85