Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02173 ATGGGCCGTGCAAAAATAGCTATGAAATACATTCGAAAGGAGAAATCTCGCAAACTAGCTTTCAATCAGAGAACAACTGGATTAAAGAGTAAAATTACTGAATTTTCTAAGTCCGGGGCAACAACATGCTTGATTGTGTACAATGATGATGATAAGTTTGGAACGATGACATGGCCAGAAGATCCAACAACTGTAAAATCTTTGCTTCGAGAATATGAGCGTCAAAAGATTGAAACACCTCCTAAGATATTTGATGTCAAAGGctactataaaaataaaaaagataaagctGAAGCTGCGATTCTCAAAGTGCGCAAAGATATCCTCAAGGAGAAGTATCTAACTTGGCATccaaatttcaataaaatggATGAGAAAAATCTCATTTCTTTCATTACTAGTATAGAGGAAAAGATTGAAGCTTGTAATGGAAAAATTAGCATGCTTAAAGATATGCAACAAAGTGATCGTAATTTATTGCAAAACACTCCTCACATGCAAATTATGGTACAAGAGAATGTTGGCATACCTCAAATGCAACAACAAATTCATGCTCCTATGAAATCAATTGATGAAATTAGTGAAATAATACAAGCTGAGAATGTTACCATACCACGaatacaacaacaaactcatgCTCCTACGAAGTCAATTGATGATATTAGTGAGATGGTGGTACAAGAGAATGTTTTCATTCGTCAAATGCAACAACAGATTCATCCTCCTGTGGAGTCAATTGATTACTTTAAAGAGATGATGAATTTCACCGATCTTGTTGATTTGCCTTCTATTTCATCAACAAAACAACTTGTGGATTGTGGTAATCAAGTGGTTAATCATGATAACTCTCTGGTTACTCAACTTGATGATCCTGTTGGTTGGACTAATTATCCCCAAATGAGTTTTCTTGGAACGATATTTTAA 924 0.3301 MGRAKIAMKYIRKEKSRKLAFNQRTTGLKSKITEFSKSGATTCLIVYNDDDKFGTMTWPEDPTTVKSLLREYERQKIETPPKIFDVKGYYKNKKDKAEAAILKVRKDILKEKYLTWHPNFNKMDEKNLISFITSIEEKIEACNGKISMLKDMQQSDRNLLQNTPHMQIMVQENVGIPQMQQQIHAPMKSIDEISEIIQAENVTIPRIQQQTHAPTKSIDDISEMVVQENVFIRQMQQQIHPPVESIDYFKEMMNFTDLVDLPSISSTKQLVDCGNQVVNHDNSLVTQLDDPVGWTNYPQMSFLGTIF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02173 307 PANTHER PROTEIN, PUTATIVE-RELATED 3 270 - -
Tsu08g02173 307 PANTHER MADS BOX PROTEIN 3 270 - -
Tsu08g02173 307 SMART madsneu2 1 59 IPR002100 GO:0003677|GO:0046983
Tsu08g02173 307 ProSiteProfiles MADS-box domain profile. 1 36 IPR002100 GO:0003677|GO:0046983
Tsu08g02173 307 SUPERFAMILY SRF-like 1 75 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02173 Tsu-Chr8 29493306 29494229 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02173 1 140 Type I MADS-box Gene Family AT5G55690 28.082 2.42e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02173 - - cam:101509886 209.92