Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02171 atgcaAACCTCTACCAGCGACGGTTCTCAATATCTTCGACCACCACTCCCTACCGGTGACGGTTCTGAATATCCTCAACCTTTTATGTTTCAATCACCACCATTTTCTATTGGTGACAATTCTCAATATCACCGACCTTTTATGTTTCAACCACCACCAACCAACATTGAGGAGTCTCTTAACGCTGAATCAGAATCAGCAATTGGGTCTACTACTAATTCTCAAGGGCTAGTGTTGTCCACTCAGGTTGGTCTAGAAAATATTACTTTTAACGAAGGAGAACgttctataaaaaaaaccgTGTTCGGTTCTCAGAAGAAGATAAATTGCTTATTCAGACATGGCTCAACATTTCTAAAGATTCAATTGTGGGAGTTGACCAAAAAGCGGATAGCTTTTGGGGTAAAACCAAAGATGGCTATAACAACAATCGCGGACAACTTATACTATAAACTAGTCGTTGCTAACAAGAAAAGTGGGCAATCTGAGACCAACGTCATGGATGAGGCACGTAAACTTTTTAATCAAGTACATGAACAACGTTTCACAATGGAGCACGCGTGGAGGTTGTTGAAGGATGAGCCTAAATGGAAGGGACAAGAAATGAACAATTCTTCAAAGATATCAAAGACATCCTCTGCTGGGACGTATTCATCAACATTTAATCTGGAAAATCCCATCGATTGTTTTGAATACAATAATGCAACTCAGACTGAGCGCCCAATGGGACAAAAGGCGGCAAAAAGGAAGGTAAAAACATCTTCATCTACAACACCGATAGTGGATTTGACTGGTATGGAAAATGTCTCGGAAAAGAAATTAGTTGTGTATGGTAAAATCGCTGAAGCAAGGTTGGCTGACAGCATACCGATGTTAAACTAG 882 0.3946 MQTSTSDGSQYLRPPLPTGDGSEYPQPFMFQSPPFSIGDNSQYHRPFMFQPPPTNIEESLNAESESAIGSTTNSQGLVLSTQVGLENITFNEGERSIKKTVFGSQKKINCLFRHGSTFLKIQLWELTKKRIAFGVKPKMAITTIADNLYYKLVVANKKSGQSETNVMDEARKLFNQVHEQRFTMEHAWRLLKDEPKWKGQEMNNSSKISKTSSAGTYSSTFNLENPIDCFEYNNATQTERPMGQKAAKRKVKTSSSTTPIVDLTGMENVSEKKLVVYGKIAEARLADSIPMLN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02171 293 PANTHER - 149 273 - -
Tsu08g02171 293 Pfam No apical meristem-associated C-terminal domain 181 257 IPR029466 -
Tsu08g02171 293 PANTHER OS07G0575233 PROTEIN 149 273 - -
Tsu08g02171 293 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02171 Tsu-Chr8 29465678 29466630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02171 150 258 Glutathione S-transferase Gene Family AT5G41240 33.333 1.57e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02171 - - ccaj:109802706 125.946