Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02149 ATGGAGGTTGATGGCGGTGATAAGAGTAATGAAAATCGAACACAAAAAAGAGGGTCGTTGAATAAAAAGCTTCTTATCGATGAAAAAGTTGAGTTGAGGAGTTTGGAAGATGGTTTTCTAGGATCATGGCATCCGGGAAAAATTGTCCGCTGTGGAAGGAAGATGCGATATGTCAAATATGACAATATCCTCAATGATGATGAATCAGATTATCTTGTTGAAGTGGTGAATGTTTCTAGTGTTTTTGATGGTGTTAATCCTTCATCTGGTTCAGATTGTGTCTATGAACGTGGGCTAATTAAACCATTGCCTCCTCCAACCGAGTTACAGATAAAGGATCTTTCATTTGGACTGTGTGTTGATGTGAATTATCAAGATGCTTGGTGGGAAGGTGTGATATTCGATCACTGTGATGGAACGAAGGAGAGGAGCATATTCTTCCCTGACTTGGGTGATGAAATGAAGGTTGGAGTTAAACAATTGAGAATCACTCAGGATTGGGATGAATCAACTGAGAATTGGTTACCGAGAGGGAAATGGGCTTTTCTCGAGTTGTTTGAGGAGTGTGAGAGGGTATCATATGTTGCAGTCTCGGTGAAACAAATTTGGTATGATGTTAGGATGAGAAAAGATTTTGTTGAAACCATTAGAGAATGGACTTGTATTGTGAAGGAGTTGTGTAGAAAGATGGTTGTCGAGGTGATTGATGATTACTATACCCTCACTCTAAACGAAGTTCGTCTCGCATTAAAACTTCCGAAGAATTTACTCGAAGGAGGATCATCTGAACCATCAGATAATGTTCATTGTGATGCTGCTAATCGTGGTAATGCAATTGGTTCTAACATTGGAATATCTGATAGGCCCAAGGAAAATGGTGACTCCTCGAACATGTTGGATGCTGATCAAAACTGTGGTAGCACTAGCCCTATTCCCTTGGTGGATGGGGAAGTTGAGAAGGAAACTCTTTTACAAGAAGAGCCTGaatcacaaaaacaaatttgCTGCTATGGTGCTGATGTAGTAGATTTAGATAAAAACCGAAGACGCAGACGCTCTACATCAATAATTTGGAGACCTTTGGTACTGTCTGAAGTTGAATTTTGTCCTGAAGTTATTAATGAGTATGCAGTTGGATGTAGGAGAAAGACGAAAGTTAGAAAACATCTTGCTTATCTTGGATGGACAATTGAATGGACCGAAAACAATTGTCATCAAAATAGGCGGTACCGGTACAAGTCACCGGATATACGTGACCAGAAGTTTTACACTTCAATTTTTCAGGTTACTAGAGTTTTGCAAGAGGATTCCAACAAGAACTCTGTGCGACCCCAAATTGACAGAAATCTTTCACATCTGCTCTGTGATCCACCACAAATGAACCAAGATTTGGATGTTTGTCCTCCAACTAAGGAGCCTTCGCTAGTTAATATTCAAGTTGAGCCAGAATTGTGTCCTCTAGCCATCGTGAAATACTACTTTCACTCATTAGAGAGAAACTTGGCTGATAAGAGAAAGTGGAAGTTGAAAGCGAAAAAACATCTGTTAGCCGAAGGATGGATCTTTGACTACCCAACTGAAAGAAGGAAGACAACATTGTATAAGTCTCTGCAGAATCAGTGTTTAAGTACACTACAAGAGCCTGAATTACATACCATAGATGGTACACCGCCAACTGAAAAGAGAAACTATAACCGTACAAGGACTTCAAAGGCTAGCGCACAAAAGGGCGTAGAGAATGAAGTACCTAACCGGGTGCTAAGATCAAGCAAACGGGTGCAGAAGGCTTTGGGTTTGACACATCAAAAGCCTCAAAATGTTCTGTCATGGTTAATAGATCAGAACATTGTGTTACCAAAGTATAAGGTCTTTTACCGGGAaacagaagaagaaggaaactCCCCCACTGTTGAGGGGAGGATAAGTTGTGAAGGAATCAAATGCAACTGTTTTCAGAAGATATATGGACTAAGTGGCTTTGCAAACCATGCCAGTGGAAGCAGTAACCGCAGGCCTTCGGCTTATATTGGAGATCATGTTGAGTGCctaagaaatagagaaaaaaataattcaagacGATATAAGGAAAATTGGTTTTGTGGAGAAGACTGTGTATGGGTCTATATGGGGCTCCAAAATCTATTGGGAAAGCCGGTTTTACTGGATGAGGACAATCTAACTTGGACATTGGTGAAGTATGTCAACTCTGAGAACAGCGGTGATGGCAGTGCTGAAAATGAATTAATAGCAGAGAGTTACACTAAACTCAGTGTTGCACTTTCGGTGATGCATGAATGTTTTGAGCCCTTACATAACTCGTTCTCTAGAAGGGATATCGTGGAAGATGTTATATTCAACCAAAGTTCTGAACTCAACAGGTTGAATTTCCAAGGTTTCTATACCGTACTGCTAGAGAGAAACGAAGAGTTGATTAGTGTGGCAACTATTAGGATATTTGGAGAGAAGATAGCAGAAGTGCCCCTTGTCGGTACAAGATTTCAATATAGACGACTTGGAATGTGTCGTGTTTTAATGAATGAGCTTGAAAAGAAACTAAAGCAACTTGGAGTGGAGAGACTGGTTCTACCTGCTGTTCCTGGTGTACTTGAAACTTGGACCAGTTCTTTTGGTTTTAAGCAGATGACGAACTTCGAGCGATCGCAGTTTTTGGACTACTCGTTCCTAGATTTCCAAGGAACAGTGATGTGTCAAAAACTTTTGTCAACACATCCATTACCAGAATCGAATGTGACTAGAGtaaAAAAGGATGGTACGAACATAGATGGTAAGCGTGCAAACCAATGCGGTCAAGTTGAAACAGCTGTGGACAACCATAAAGCAATAAATAGAACAACTTCAGATTATGCACAATACTTAGAGACATATACTGAAGAGACTAGTACTAGGAGTTTGACTACTAGTGAGGAAGAATCTCAAATGACTGTAGAGTCCAAGGTTGAGAAATCTAAGTCACCAGAGCCAGAGCCTGTGACTAGATCACCAAAGTCAGAGACTGATTCTGCTTAG 3027 0.3981 MEVDGGDKSNENRTQKRGSLNKKLLIDEKVELRSLEDGFLGSWHPGKIVRCGRKMRYVKYDNILNDDESDYLVEVVNVSSVFDGVNPSSGSDCVYERGLIKPLPPPTELQIKDLSFGLCVDVNYQDAWWEGVIFDHCDGTKERSIFFPDLGDEMKVGVKQLRITQDWDESTENWLPRGKWAFLELFEECERVSYVAVSVKQIWYDVRMRKDFVETIREWTCIVKELCRKMVVEVIDDYYTLTLNEVRLALKLPKNLLEGGSSEPSDNVHCDAANRGNAIGSNIGISDRPKENGDSSNMLDADQNCGSTSPIPLVDGEVEKETLLQEEPESQKQICCYGADVVDLDKNRRRRRSTSIIWRPLVLSEVEFCPEVINEYAVGCRRKTKVRKHLAYLGWTIEWTENNCHQNRRYRYKSPDIRDQKFYTSIFQVTRVLQEDSNKNSVRPQIDRNLSHLLCDPPQMNQDLDVCPPTKEPSLVNIQVEPELCPLAIVKYYFHSLERNLADKRKWKLKAKKHLLAEGWIFDYPTERRKTTLYKSLQNQCLSTLQEPELHTIDGTPPTEKRNYNRTRTSKASAQKGVENEVPNRVLRSSKRVQKALGLTHQKPQNVLSWLIDQNIVLPKYKVFYRETEEEGNSPTVEGRISCEGIKCNCFQKIYGLSGFANHASGSSNRRPSAYIGDHVECLRNREKNNSRRYKENWFCGEDCVWVYMGLQNLLGKPVLLDEDNLTWTLVKYVNSENSGDGSAENELIAESYTKLSVALSVMHECFEPLHNSFSRRDIVEDVIFNQSSELNRLNFQGFYTVLLERNEELISVATIRIFGEKIAEVPLVGTRFQYRRLGMCRVLMNELEKKLKQLGVERLVLPAVPGVLETWTSSFGFKQMTNFERSQFLDYSFLDFQGTVMCQKLLSTHPLPESNVTRVKKDGTNIDGKRANQCGQVETAVDNHKAINRTTSDYAQYLETYTEETSTRSLTTSEEESQMTVESKVEKSKSPEPEPVTRSPKSETDSA 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02149 1008 CDD NAT_SF 802 862 - -
Tsu08g02149 1008 MobiDBLite consensus disorder prediction 965 1008 - -
Tsu08g02149 1008 SMART agenet_At_2 112 169 IPR014002 -
Tsu08g02149 1008 Pfam Tify domain binding domain 639 676 IPR032308 -
Tsu08g02149 1008 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 679 920 - -
Tsu08g02149 1008 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 546 676 - -
Tsu08g02149 1008 Gene3D - 759 900 - -
Tsu08g02149 1008 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 796 891 IPR016181 -
Tsu08g02149 1008 MobiDBLite consensus disorder prediction 550 579 - -
Tsu08g02149 1008 MobiDBLite consensus disorder prediction 558 577 - -
Tsu08g02149 1008 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 546 - -
Tsu08g02149 1008 Pfam Agenet domain 28 104 IPR008395 -
Tsu08g02149 1008 MobiDBLite consensus disorder prediction 980 1008 - -
Tsu08g02149 1008 PANTHER PHD ZINC FINGER PROTEIN 679 920 - -
Tsu08g02149 1008 PANTHER PHD ZINC FINGER PROTEIN 546 676 - -
Tsu08g02149 1008 PANTHER PHD ZINC FINGER PROTEIN 5 546 - -
Tsu08g02149 1008 MobiDBLite consensus disorder prediction 965 979 - -
Tsu08g02149 1008 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 746 907 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02149 Tsu-Chr8 29158422 29168424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02149 679 855 PHD Transcription Factor Family AT5G58610 50.838 2.10e-47 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02149 - - gmx:100806062 644.039