Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02146 ATGACCATGGCCGCGTCTGCTGCTACCACCGCTTCTCATTTCCTTCGCCCTCTTTATCCAATCAAATTCCCTAAATGCCCTCACCTTTTATCAGATTCACAGTTTCGCCTTCCGCTACTCAGTTCCCAAACCCAAAGAACCACCATTCGTGCTACATCGGCTGTTGTTGTGGAGTCGGATTTAAGTACAAAGCAGGATCAGGGAACACAAGTTGATCTGTTTGCATGCCCGATATGTTATGAACCATTGATAAGAAAAGGTCCTGTTGGCCTGAACTTATCAGCAATCTACAGGTCTGGTTTCAAGTGTAAGAGATGTCAAAAATCATATACTAGCAAAGACGGGTATTTGGACCTGACAGTGACTTCTGGGTTGAGAGATTACATTGAAGTTCAACCGGTTAGGACTGAACTTTTTAGGAGTCCCCTTGTTTCATTCTTATATGAAAGAGGTTGGCGCCAGAATTTTAGGCAAAGTGGTTTTCCTGGTCTGGATGAAGAGTTCAAAATGGCTCAAGAGTACTTCAAACCAGCTAAAGGTGGTCTGGTTGTCGATGTTAGCTGTGGAAGTGGTTTGTTTTCCCGAAAATTTGCAAAATCTGAAACCTATTCTGGAGTCATTGCACTAGATTTTTCAGAAAATATGCTTCGCCAATGTTACAATTTCATTAAGAAAGATGATACACTTTCAACCAGTAATATTGCCCTTGTAAGGGCAGATATTTCTAGGCTTCCCTTTGCGTCAGGTTCAGTTGATGCTGTTCATGCTGGTGCTGCTTTGCATTGCTGGCCATCTCCCTCTAACGCTGTTGCTGAAATCACCCGTGTACTAAGAAGCGGTGGAGTATTTGTTGGAACCACTTTTCTTCGATATACTTCATCAACTCCCTGGATTGTACGACCCTTCAGAGAGAGAAATTCTCAAGGCTATGGATTTTTAACGGAGGAAGAAATCAAAGACCTTTGCACTTCATGCGGTCTTACAAATTACTCATGTAAAATTGAGAAGTCTTTTATTATGTTTACGGTTCAGAAGCCATAA 1041 0.4207 MTMAASAATTASHFLRPLYPIKFPKCPHLLSDSQFRLPLLSSQTQRTTIRATSAVVVESDLSTKQDQGTQVDLFACPICYEPLIRKGPVGLNLSAIYRSGFKCKRCQKSYTSKDGYLDLTVTSGLRDYIEVQPVRTELFRSPLVSFLYERGWRQNFRQSGFPGLDEEFKMAQEYFKPAKGGLVVDVSCGSGLFSRKFAKSETYSGVIALDFSENMLRQCYNFIKKDDTLSTSNIALVRADISRLPFASGSVDAVHAGAALHCWPSPSNAVAEITRVLRSGGVFVGTTFLRYTSSTPWIVRPFRERNSQGYGFLTEEEIKDLCTSCGLTNYSCKIEKSFIMFTVQKP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02146 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 340 IPR029063 -
Tsu08g02146 346 Gene3D Vaccinia Virus protein VP39 139 343 IPR029063 -
Tsu08g02146 346 CDD AdoMet_MTases 183 289 - -
Tsu08g02146 346 PANTHER - 33 344 - -
Tsu08g02146 346 PANTHER METHYLTRANSFERASE 33 344 - -
Tsu08g02146 346 Pfam Methyltransferase domain 184 284 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02146 Tsu-Chr8 29071488 29079331 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tsu08g02146 Methyltransf_11 1.8e-20 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02146 - - gmx:100812067 552.362