Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02122 ATGGGAGAAACAACACACGACCACCACACAGGAGCAccagaaacaacaacaacaacaacaacaacaaaaccagCAGCAACCTCGTCTAAGAGAATTGCAGGAGAAATCGTGGAAGTGCAAGGAGGTCACATTGTACGGTCAACTGGACGGAAAGATCGTCACAGCAAAGTATGCACGGCGAAAGGTCCCCGTGACCGCCGTGTTCGACTCTCGGCCCACACCGCGATCCAATTCTACGACGTGCAAGACCGTTTGGGCTACGACCGCCCCAGTAAGGCAGTTGATTGGCTTATCAAAAAAGCCAAATCCGCCATTGACGAACTTGCTCAGCTTCCGGCATGGAATCCCACCGCCACATGTTCAACAACACcacaacaacagcagcagcagcaacagcagctgcaacaacaacaaacaaacgaAATGTTCAACCGGCAATCTCCGGTGGACAACCATCAAGTAACCGCTTCCACCAGTCACCGCTCAGCGGCTGCATTAGAGCGAAGAATGCCACCACAACAAGAACAATTTTCTTCGCAACAACTAGAGTTAGACTATAACAATAGCAGCGGCGGGAAACATGGTTTTCTTCAAGGCTCATTGGATACTGACATTGCGGATACTATTAAGTCGTTTTTTCCAGTTGAAACGCAGACGACGTCGTTTCACAGTTACCCACAACCGCCGGATTTGCTTTCTCGAACGGCGGTTACCACCCAGCAGCAAGATCTCCGCCTCTCATTGCAATCTTTTCAAGATCCTATTCTGCTTCAGAGCCACCATGACAACCACCATCACCACAACCAAGTGCTTTTCGCCGGAAACTCCTCACTCGGCGACTATGACGGTGGTGGAAGTGGAAGCACCTTGTGGTCtgagcagcagcagcagcagcaacaggAGGAAAATGACAATGGTAGATTGCACAGAATGATGGCTTGGAATGCTAATGCTAATGTTAATGCTGCAGACGGTGGTAACAGTGGCCATGGTGGTGGATTTGTGTTCAGCGCACCCGCTGCTCCCACATTCGGCGGTTATGGCCAGTTTTTTACTCAGAGGGGACCCCTTCAGTCCAGTTACAATCCTTCAGTTCGTGCTTGGATAGATCCTTCAATGGCGGCGACGGCTAATATAGCCGATCACCATCATCACTATCTTTCGCCAATGATCCATCAGGCTTCTGTCTCAGGTGGTGGATTCTCCGGCTTTCGCATACCAGCACGAATTCAGGGTGAAGAGGAACATGACGGTGTATCTGATAAACCGTCCTCTGCTTCCTCTGATTCTCACCATTGA 1299 0.4588 MGETTHDHHTGAPETTTTTTTTKPAATSSKRIAGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAQLPAWNPTATCSTTPQQQQQQQQQLQQQQTNEMFNRQSPVDNHQVTASTSHRSAAALERRMPPQQEQFSSQQLELDYNNSSGGKHGFLQGSLDTDIADTIKSFFPVETQTTSFHSYPQPPDLLSRTAVTTQQQDLRLSLQSFQDPILLQSHHDNHHHHNQVLFAGNSSLGDYDGGGSGSTLWSEQQQQQQQEENDNGRLHRMMAWNANANVNAADGGNSGHGGGFVFSAPAAPTFGGYGQFFTQRGPLQSSYNPSVRAWIDPSMAATANIADHHHHYLSPMIHQASVSGGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSHH 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02122 432 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Tsu08g02122 432 MobiDBLite consensus disorder prediction 116 179 - -
Tsu08g02122 432 Pfam TCP family transcription factor 49 161 IPR017887 -
Tsu08g02122 432 MobiDBLite consensus disorder prediction 283 304 - -
Tsu08g02122 432 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 432 IPR005333 GO:0003700
Tsu08g02122 432 MobiDBLite consensus disorder prediction 283 302 - -
Tsu08g02122 432 MobiDBLite consensus disorder prediction 411 432 - -
Tsu08g02122 432 MobiDBLite consensus disorder prediction 116 162 - -
Tsu08g02122 432 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 432 - -
Tsu08g02122 432 MobiDBLite consensus disorder prediction 11 28 - -
Tsu08g02122 432 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02122 Tsu-Chr8 28708256 28711261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02122 33 432 TCP Transcription Factor Family AT3G15030 46.259 4.39e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu08g02122 TCP 1.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02122 - - mtr:MTR_8g463380 638.262