Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02116 ATGGCAGGAAGAGAAATCCTCCATAAGATGAAGGAAAAAGTTATGGGACCATCTGATCCAGACTCAGGGAAAGGAAAGAGCAAGATGTCAAAGCATGTAACTCATGGCTTTCACTTGGTAAAGGGAAGATCAAATCATGCCATGGAAGACTATGTCGTTGCTGAATTCAAGCATGTTGATGACAATGAGTTGGGTTTATTTGCAATATTTGATGGTCACGCAGGTCATAGTGTACCTGATTACTTGCGGTCTCATTTGTTTGATACTATCTTAAAAGAGCCTGATTTCTGGACTGAACCTGCGGAGAGTGTGAAGAGAGCATATAGTGAAACTGATTCTACTATTTTAGAGAAATCAGGTGATTTGGGTAGAGGAGGTTCAACTGCAGTTACAGCAATACTCATTAATTGTCAAAAGCTAGTAGTGGCCAATATTGGAGATTCCCGGGCTGTCTTATCTGAGAATGGCGTTGCTATACCACTGTCTGTGGATCATGAACCAACAACAGAACGCGATGATATAAAAAACAGAGGTGGTTTTGTATCTAATTTCCCAGGGGATGTGCCACGGGTCGATGGGCAATTAGCAGTGTCAAGGGCTTTTGGCGACAAAAGCCTAAAGATACACATGACCTCAGAACCACATGTGATAGTGAAAGTGATCGATGATGGTGGAGAGTTTGTTATATTAGCCAGTGATGGGTTATGGAAGGTTATGTCAAATCAAGAAGCAGTTGATGCTATCAGAGATATTAAGGATGCTCGGTCAGCAGCGAAGCGTCTTACCGAAGAAGCGCTCAACAGGAAAAGCTCAGATGATATCTCTTGCATTGTTGTGAGGTTTCACTGA 849 0.4229 MAGREILHKMKEKVMGPSDPDSGKGKSKMSKHVTHGFHLVKGRSNHAMEDYVVAEFKHVDDNELGLFAIFDGHAGHSVPDYLRSHLFDTILKEPDFWTEPAESVKRAYSETDSTILEKSGDLGRGGSTAVTAILINCQKLVVANIGDSRAVLSENGVAIPLSVDHEPTTERDDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHMTSEPHVIVKVIDDGGEFVILASDGLWKVMSNQEAVDAIRDIKDARSAAKRLTEEALNRKSSDDISCIVVRFH 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02116 282 SMART PP2C_SIG_2 43 281 IPR001932 -
Tsu08g02116 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Tsu08g02116 282 Gene3D - 16 282 IPR036457 -
Tsu08g02116 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 281 - -
Tsu08g02116 282 SMART PP2C_4 30 279 IPR001932 -
Tsu08g02116 282 Coils Coil 244 264 - -
Tsu08g02116 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
Tsu08g02116 282 MobiDBLite consensus disorder prediction 8 30 - -
Tsu08g02116 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Tsu08g02116 282 CDD PP2Cc 41 281 IPR001932 -
Tsu08g02116 282 SUPERFAMILY PP2C-like 30 282 IPR036457 -
Tsu08g02116 282 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
Tsu08g02116 282 MobiDBLite consensus disorder prediction 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02116 Tsu-Chr8 28556341 28560179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02116 1 282 PP2C-type Phosphatase Gene Family AT3G15260 73.010 2.21e-159 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02116 K17506 - gmx:100787942 479.559