Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02058 ATGTTATCAAAGAGACTGAGTGAATCAGACGACATTGTTTTTACAGTGTTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCTCGGTGTATTCCCTTTGTTGGACGAGGAATCAAATCTCACCGAGGCTTCTGATTCAACATTTTCCAACAAACTAAAGAATCTCCTGGATGCTAATCATTGCTTCAAAGAGGAAAGAGGTGGAGCTTTCAGTGTTCGTCATTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTATAGAAAAGAACAGAGATACGTTGTCTTCTAATTCCATTCAACTCATTTCATCATGTGAACTGTTGAATTTGTTCTCCGAAGTGTTTAACCAATCTGAGGAGCATGGAAATTCCACTTTCCATTTTGATGCACTATACTCACAGAAGAGAGGTGTTGGAACAAACTTCAAGGATCAATTTTTCAAGTTGATGCATCAGTTGGAGAGCACCACTCCTCACTTTATTTCGCTATCTTGTGGTGTTCTAGAAGCTGTTAGAATTTCAAGGGCTGGATATCCTACTCGAATGAACCATCAAGAGTTTTCTAGACGGTACGAGTTTTTGCTTTCTGGGACTGATGGCAGTTATATGTCTAAATTTTCTTTGCAGGTGATTTGTGGGTGGCTGGTTCGTAGGGATTCTAGTTACGACAATATATTGAGGAATAATCATGATAATGCAAAACCTAGACCGAAATCTCATGTTAACATGCCAGAAGTTAAGCGAGCAGAGGAGTATTTCGAATGA 783 0.3908 MLSKRLSESDDIVFTVLDFEDNQECLDLFEKKPLGVFPLLDEESNLTEASDSTFSNKLKNLLDANHCFKEERGGAFSVRHYAGEVLYDTNGFIEKNRDTLSSNSIQLISSCELLNLFSEVFNQSEEHGNSTFHFDALYSQKRGVGTNFKDQFFKLMHQLESTTPHFISLSCGVLEAVRISRAGYPTRMNHQEFSRRYEFLLSGTDGSYMSKFSLQVICGWLVRRDSSYDNILRNNHDNAKPRPKSHVNMPEVKRAEEYFE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02058 260 SMART MYSc_2a 1 234 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu08g02058 260 ProSiteProfiles Myosin motor domain profile. 1 167 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu08g02058 260 PANTHER MYOSIN-2 ISOFORM X1 8 167 - -
Tsu08g02058 260 PANTHER MYOSIN 170 204 - -
Tsu08g02058 260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 216 IPR027417 -
Tsu08g02058 260 PANTHER MYOSIN-2 ISOFORM X1 170 204 - -
Tsu08g02058 260 Gene3D - 2 162 - -
Tsu08g02058 260 Pfam Myosin head (motor domain) 10 167 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu08g02058 260 PANTHER MYOSIN 8 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02058 Tsu-Chr8 27248860 27255179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02058 8 202 Myosins gene family AT5G54280 53.881 1.81e-65 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02058 K10357 - gmx:100819335 252.677