Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02049 ATGGTAATTTCAGGAAAGCAGCATGGTTGGGAAAACACTAAAGGCTTCACACTCCAAGTCCTAACAGGAAGGTGGTTTATGGTGTTTTCATCATTTATGATCATGTCAGTATCTGGAGCAAGCTACATGTTTGGCTTATATTCAAGAGAAATAAAATCAGTTTTAGGCTATGACCAATCCACTCTTACCCTCTTAAGCTTCTTCAAAGACTTAGGCTCTAACATAGGCATTCTATCAGGCCTACTCAATGAAATCACACCCCCTTGGGTTGTCTTAACAATTGGTGGAATTCTCAACTTTTTTGGCTATTTCATGATATGGCTTGCAGTCACAAGAAAAATTCCTAAACCACCAATAtggaatatgtgtttatacataTTCATTGGAGCAAATTCTCATTGTTCAACCAACACTGGAGCATTAGTTACAAGTGTAAAGAATTTCCCTGGTAGTAGAGGTGTTGTTATAGGTCTTTTGAGTGGTTATCTTGGTTTGAGTGGAGCTATCATCACTCAACTATACTATGCTTTCTATGGAAATGACTCTAAATCTTTAATTTTGCTTATGGCTTGGTTACCAACTGCtgtaacttttgtttttatgCCGGTTATCAAACACCATAAGATGGCTGAACAACCAAATGATTCTAATGCATTCTATAATTTCCTTTACATGACTTTAATCCTTGCAGGTTTCCTCATGATAATGATCATTGTGCAAAAATGTTTCAACTTCACTAATAGTGAGTATTATGTTACTTCCACTGTGATGCTTCTCTTGCTCATCATCCTGCCtcttattgttgttattatggAAGAACAAAGGATTTCGAAGAACAAAAACGGCGAAAATTTGAATATAACTACACATATGCCACCAAATCTAGAGAAGAATCTTGAAGTTAGAGGAGAGActattcaaaatcaaaacatacaaaTGCCCCTTTCTAGAGGGGAAGATCATACAATACTTCAAGCCATTTTCAGCCTTGATATGTTGACTCTTTTTGTAGCCACAATTTGTGGACTTGGTGGAACTCTTACTGTGGTAAATAACTTGAGTCAGATAGGATTATCTTTAGGATATCCTGCACATAGTATAACCACATTTGTGTCCCTAATGGCAATTTGGATTTATCTAGGTAAAGTTACACAAGGGGTTATCTCAGAATTTATCATAACCAAGTTAAAACTCCCTAGGCCTCTAATGCTCACATCAATCCTTATATTGTCTTGTTTTGGTCACCTTCTAATTGCATTTGATGTTCCAAATGGTCTTTATGTAGCATCAATTATTATTGGTTTTTGCTTTGGAGCAAATTGGCCAGTACTATTTTCAATCATATCTGAACTATTTGGTCTTAAATATTACTCAACATTGTACAATGTTGGGTCAATAGCAAGTCCAATTGGGTCATACTTGTTAAGTGTGAGGGTTGCTGGTCATTTATATGACAAGGAAGCCACAAGACAAATGGCAATATTAGGATTAAAGAGGAAGGAAGGGGAGGAGTTAAATTGCAATGGAAGTGAGTGCTACAAATTGGCTTTCATTATAATCACTGCTGTTAGTCTCTTTGGGGCACTTGTGTCTCTAACTTTGGTGATAAGGACTAGAAAGTTTTATAAAGGTGATATATACAACAAGTTCAGAGAGGAAGCTAGAACTGTTGAAAATGAATTGGTTGTGACTCAGAACAAGGTTGGACCTGCCTAA 1716 0.3526 MVISGKQHGWENTKGFTLQVLTGRWFMVFSSFMIMSVSGASYMFGLYSREIKSVLGYDQSTLTLLSFFKDLGSNIGILSGLLNEITPPWVVLTIGGILNFFGYFMIWLAVTRKIPKPPIWNMCLYIFIGANSHCSTNTGALVTSVKNFPGSRGVVIGLLSGYLGLSGAIITQLYYAFYGNDSKSLILLMAWLPTAVTFVFMPVIKHHKMAEQPNDSNAFYNFLYMTLILAGFLMIMIIVQKCFNFTNSEYYVTSTVMLLLLIILPLIVVIMEEQRISKNKNGENLNITTHMPPNLEKNLEVRGETIQNQNIQMPLSRGEDHTILQAIFSLDMLTLFVATICGLGGTLTVVNNLSQIGLSLGYPAHSITTFVSLMAIWIYLGKVTQGVISEFIITKLKLPRPLMLTSILILSCFGHLLIAFDVPNGLYVASIIIGFCFGANWPVLFSIISELFGLKYYSTLYNVGSIASPIGSYLLSVRVAGHLYDKEATRQMAILGLKRKEGEELNCNGSECYKLAFIIITAVSLFGALVSLTLVIRTRKFYKGDIYNKFREEARTVENELVVTQNKVGPA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02049 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 571 - -
Tsu08g02049 571 SUPERFAMILY MFS general substrate transporter 220 541 IPR036259 -
Tsu08g02049 571 SUPERFAMILY MFS general substrate transporter 11 206 IPR036259 -
Tsu08g02049 571 PANTHER MFS TRANSPORTER 5 571 - -
Tsu08g02049 571 CDD MFS_Mch1p_like 23 528 - -
Tsu08g02049 571 Gene3D MFS general substrate transporter like domains 326 542 IPR036259 -
Tsu08g02049 571 Pfam Nodulin-like 24 270 IPR010658 -
Tsu08g02049 571 Coils Coil 547 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02049 Tsu-Chr8 27139361 27141348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02049 14 553 Nodulin-like Gene Family AT2G39210 61.111 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02049 - - gmx:100789645 843.958