Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01991 ATGGAGATTAAAAACAAACTCCAAGTTTCAAATGCAGGGCAACAAATTGGTGGAAccaattttttcaaaacttgtTTCAATGTACTCAATGCCTTGACAGGTATTGGGATACTATCAATGCCATATGCAATTTATCAAGGAGGGTGGTTAAGTATTATGCTGCTAATTATTTTTGGGATGATATGTTGCTACACAACTTTACTTTTGGAAAGGTGTATGAATGCACATTCAGGAATAAAATCTTATGCTGATATAGGTGAGGTTGCTTTTGGGTATAAAGGAAGAGCTGTAATAGCTATTTTCATATACATTGAGTTGTTTTTAGTTGCTGTGGAGCTTCTTATATTAGAAGGAGACAATTTGGAGAAACTTTTCCCAAATATGAGATTCACAATATTTGGATTTAGAATTGGTGGTAAAAGTTGTTttgtaattctcactgctttgGCAATACTACCAACAACATGGTTGAGAAACTATGGAGCTCTAGCCTATATATCAATTGGTGGAGTATTCActtcaattattttaattggTTGTGTTGTGTGGGTTGGTGAAGTTGATGGTGTTGGCTTTCATGAAAGAGGGGATTTGATACATTGGGGTGGACTATCTACTTCTATGAGcatttttgcattttgttaCAATGCTCATGCATTAATGCCCACAATTCTCAATTCCATGAGTGAAAGAAAACAATTTTCCAAGGTTGTGTTGATTTGCTTTATGGCAAGTACTATTATCTATGGAACTATTGTTGTTTTAGGCTACATGATGTTTGGAGAACATTTGAAGTCTCAAATCACATTAAATTTACCTACAAACACTATAAGTACTAAAATAGCAATCTATTCCACAATAATTAATCCTTTCACTAAGTATGCTATTGAAATTAGCCCAATAACAATTGCTATTGAAGACAAATGGCATTTATGCATGACAAGACCTATTAGCATTTTAGTCAGAACAATCATTGTGGCTAGCAGTGTACTTGTGGCACTATACATTCCATTTTTTGCATACATTATGGCGTTTATTGGTGCGTTCTTGAGTGTAGCAATCACATTGTTGTTTCCATGTCTTTGCTACCTAAAGATAAACAAAGCTGCTAAGAAATTTGGATTTGagctcatcatcatcatgggAATTTTGATCATTGGAACGTTTATTGGAATACAGGGTACCTACAATTCAGTGGAGAAAATAGTAAATCAAATGAAGCTTTGA 1227 0.3187 MEIKNKLQVSNAGQQIGGTNFFKTCFNVLNALTGIGILSMPYAIYQGGWLSIMLLIIFGMICCYTTLLLERCMNAHSGIKSYADIGEVAFGYKGRAVIAIFIYIELFLVAVELLILEGDNLEKLFPNMRFTIFGFRIGGKSCFVILTALAILPTTWLRNYGALAYISIGGVFTSIILIGCVVWVGEVDGVGFHERGDLIHWGGLSTSMSIFAFCYNAHALMPTILNSMSERKQFSKVVLICFMASTIIYGTIVVLGYMMFGEHLKSQITLNLPTNTISTKIAIYSTIINPFTKYAIEISPITIAIEDKWHLCMTRPISILVRTIIVASSVLVALYIPFFAYIMAFIGAFLSVAITLLFPCLCYLKINKAAKKFGFELIIIMGILIIGTFIGIQGTYNSVEKIVNQMKL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01991 408 Pfam Transmembrane amino acid transporter protein 19 396 IPR013057 -
Tsu08g01991 408 PANTHER OS05G0424000 PROTEIN-RELATED 15 404 - -
Tsu08g01991 408 PANTHER OS06G0228500 PROTEIN 15 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01991 Tsu-Chr8 26019270 26032209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01991 2 406 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.963 2.57e-133 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01991 K15015 - gmx:100812006 568.54