Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01985 ATGATATTCATAAAAAGATTGGCACCAAGAGTATATTGTCTTGTACCATTTCAAAAATGGCAAGTATATTCTAGATTGAGAAAGGAAGACATGGATCTGCCAGGTACACTTGTAGATGAGAAGGAAGTAGCCATAAATCGACACTCAAATGTGTCGGATCAAGGATTGGAGGAGTTCAAAAATGAAATTGCGTTGATTGCAAAGCTTCAACACCATAATCTTGTGAATCTTCTTGGTTGCTGCATTCATAAAGAGGAAATGTTGTTCTTATATGAATACATGCCTAATAAGAGTTTAGACTACTTCATCTTTGAGTATGCTGTACATGGTCGTTACTCCATGAAATCAGATGTGTTTAGTTTTGGCGTAATAGTATTGGAGATAATCAGCGGAAATAAGATTAAGCGATTTTATGACCCAGAACACTCTCTCAACCTTCTTGGACATGCTTGGAGACTCTGGATTGAAAACATGCCAATGGAACTACTAGATACACATTTACTTGATATGTGCATTTCTTCCGAAGTCATACGATGCATACAAGTGGGGTTATTATGCATACAACAAAAACCTGGAGATCAGCCGGACATGTCCTCGGTCATTCTTATGTTGAATGGTGAAAAATTATTGCCTCAGCCGAAGGCTCCTGGATTTTTTATCGGAAATGGTTCAACTGAAACCATGTCCCCATCCTCAAATCAGATGTCAATTACAAATTTTGTGGGAAGATAG 732 0.3784 MIFIKRLAPRVYCLVPFQKWQVYSRLRKEDMDLPGTLVDEKEVAINRHSNVSDQGLEEFKNEIALIAKLQHHNLVNLLGCCIHKEEMLFLYEYMPNKSLDYFIFEYAVHGRYSMKSDVFSFGVIVLEIISGNKIKRFYDPEHSLNLLGHAWRLWIENMPMELLDTHLLDMCISSEVIRCIQVGLLCIQQKPGDQPDMSSVILMLNGEKLLPQPKAPGFFIGNGSTETMSPSSNQMSITNFVGR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01985 243 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 105 240 - -
Tsu08g01985 243 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 105 240 - -
Tsu08g01985 243 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 35 105 - -
Tsu08g01985 243 SUPERFAMILY Protein kinase-like (PK-like) 38 220 IPR011009 -
Tsu08g01985 243 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 35 105 - -
Tsu08g01985 243 Gene3D Phosphorylase Kinase; domain 1 17 91 - -
Tsu08g01985 243 Gene3D Transferase(Phosphotransferase) domain 1 92 206 - -
Tsu08g01985 243 Pfam Protein tyrosine and serine/threonine kinase 40 103 IPR001245 GO:0004672|GO:0006468
Tsu08g01985 243 SMART tyrkin_6 35 180 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01985 Tsu-Chr8 25899933 25901436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01985 93 220 Receptor kinase-like Gene Family AT4G23140 48.837 1.70e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu08g01985 PK_Tyr_Ser-Thr 3.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01985 - - mtr:MTR_8g465590 236.884