Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01946 ATGGAGATAGAAAGCCAGCTCCAAGTTTCATCAAATTCAGGGCAGCAAAAAGAAGGAACCTCTTTTTTCAAAGCTTGTTTCAATGGTATCAACACCTTGGCAGGAATTGGGATGCTCTCAATGCCATATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTTATGctgctttttatttttgccatgATATGTTGGTACACTGCTTTACTTCTAGAAAGGTGTATGAATCAACAACCATTAATTAAATCCTATGTTGATATAGGTGAGGTTGCTTTTGGTTACAAAGGAAGAGCTGTTATAGCAAGTTTTATATATTTAgagttgtttttaatttctgttGAGCTTCTTATATTAGAAGGTGACAATTTGGAGAAGTTGTTTCCAAATATGAGTCTCACAATTATTGGATTTAAAATTGGAAGTAAAACAGCTTTTATGTTAATCACTGCTTTAGTAGTATTACCAACAACTTGGTTGAGAAGTTTAGGAGCTTTGGCCTACATATCTGTTGGTGGTATATTTGCTTCTGTTATTTTAATTGGTTGTGTTTTGTGGGTGGGAGAAGTTGATGGTATTGGATTTCATGAAGGAggtaaattagtaaatttgggTGGATTATCTACTGCTATGAGCCTTTTTGCTTTCTGTTACTGTGCTCATGCATTATTGCCAACAATGTGCAATTCTATGAAGGATAGAAAGCAATTTTCCAAGGTTTTGCTGGTTTGTTTTGTGGCAAGCACAATTATCTATGGAACTGTAGCTGTTTTAGGCTACACAATGTTTGGAGATCATTTGAAATCTCAGATCACATTAAATCTACCAACAAATACAATAAGTACAAAAATAGCAATATATACCACAGTAATTAATCCTTTCACTAAGTATCCAATTGTAATCACTCCAATAACCAATGCAATTGAGGAAAAATGGCATCTATGCAGCAAGAGCAGACCAATTAGCATTCTAATGAGAACAACAATTGTGATCAGCAGTGTACTTGTGGCACTATTTGTTCCATTTTTTGGATACATTATGGCATTTATTGGTGCTTTCTTGAGTGTGTCAATCTCATTGTTGTTTCCTTGCCTTTGCTACTTAAAGATTCACAAAGCTGCTAGGAGATTTGGGTTAGAGTTGATCATTATCATAGGAATTCTGATCTTTGGTACACTTATTGGAATACATGGTACCTACATTTCACTTGTGAAAATAGCAAATAGTATGTAG 1227 0.335 MEIESQLQVSSNSGQQKEGTSFFKACFNGINTLAGIGMLSMPYAVSQGGWLSFMLLFIFAMICWYTALLLERCMNQQPLIKSYVDIGEVAFGYKGRAVIASFIYLELFLISVELLILEGDNLEKLFPNMSLTIIGFKIGSKTAFMLITALVVLPTTWLRSLGALAYISVGGIFASVILIGCVLWVGEVDGIGFHEGGKLVNLGGLSTAMSLFAFCYCAHALLPTMCNSMKDRKQFSKVLLVCFVASTIIYGTVAVLGYTMFGDHLKSQITLNLPTNTISTKIAIYTTVINPFTKYPIVITPITNAIEEKWHLCSKSRPISILMRTTIVISSVLVALFVPFFGYIMAFIGAFLSVSISLLFPCLCYLKIHKAARRFGLELIIIIGILIFGTLIGIHGTYISLVKIANSM 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01946 408 Pfam Transmembrane amino acid transporter protein 19 399 IPR013057 -
Tsu08g01946 408 PANTHER OS05G0424000 PROTEIN-RELATED 16 405 - -
Tsu08g01946 408 PANTHER OS06G0228500 PROTEIN 16 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01946 Tsu-Chr8 24980702 24983420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01946 1 408 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.561 5.25e-137 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01946 K15015 - gmx:100812006 579.326