Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01937 ATGGAGTACTACATACCTCTCTTGTTTGTTCTCTTCACTGCTCTTCTTGTCTCAACTTCTCAAGCCTTGAAATTGGACGTTGGTGGAAGTGATGGTTGGACTCTAAACCCTTCAGAGAATTACAACCATTGGGCTGGAAGGTACAGGTTCCAAATCAATGATGTTATAGTTTTCAAATACAAGAAGGGTTCAGACTCAGTGTTGGAAGGTCAGAAATTAACCCTTGTTGTTATATCCCCACGTAAACACACACCACCCTCTGTTGCTACTCCAACATCACCACCAAAATCTTCCCCAGCACCCTCTGTTTCACCTTCTCCACCTGCAAATTCCCCTGTACCGGCTGGTGGAGCTAAGGCTTCATCTCCCTCTCCAATCACCACCCCTCCTGCCGGTGGACCTATAACTTCATCTCCATCTTCGGTGAGCACACCTCCAGCCAGTGGACCTGCAGCTTCATCTCCTTCTTCATTGAGCACACCTTCGGCCGGTGGACCTACGGCTTCATCTCCATCTCCAGTGAGCACATCTCCGGCTGGTGGACCCACAACTTCCTCTCCTACGAGTACCCCTACGACCGGTGGACCACCAGCGCCATCACCAGGGTCTCTTACGCCAGAAGGTTCACCAACATCTCAATCTCCGGGGAGCTCTGCACCAGCAGATGGTTCTATGGCACCAGGAACACCAACACTAGGACCGTCAGGAACTGAAAATGCAAAGGCACCGTCGAGAAGTAGTGGCTCCTATGTTGGTCCTTCGAGCTTTGTGGTGTATTCTGTTATTGTTGTCGTTAGTGCTCTGTTATTGAGTTACTGA 819 0.4994 MEYYIPLLFVLFTALLVSTSQALKLDVGGSDGWTLNPSENYNHWAGRYRFQINDVIVFKYKKGSDSVLEGQKLTLVVISPRKHTPPSVATPTSPPKSSPAPSVSPSPPANSPVPAGGAKASSPSPITTPPAGGPITSSPSSVSTPPASGPAASSPSSLSTPSAGGPTASSPSPVSTSPAGGPTTSSPTSTPTTGGPPAPSPGSLTPEGSPTSQSPGSSAPADGSMAPGTPTLGPSGTENAKAPSRSSGSYVGPSSFVVYSVIVVVSALLLSY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01937 272 MobiDBLite consensus disorder prediction 82 252 - -
Tsu08g01937 272 PANTHER BLUE COPPER PROTEIN 69 271 IPR039391 GO:0009055
Tsu08g01937 272 Pfam Plastocyanin-like domain 33 72 IPR003245 GO:0009055
Tsu08g01937 272 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 1 69 - -
Tsu08g01937 272 MobiDBLite consensus disorder prediction 87 112 - -
Tsu08g01937 272 PRINTS Proline rich extensin signature 166 191 - -
Tsu08g01937 272 PRINTS Proline rich extensin signature 123 139 - -
Tsu08g01937 272 PRINTS Proline rich extensin signature 83 95 - -
Tsu08g01937 272 PRINTS Proline rich extensin signature 96 117 - -
Tsu08g01937 272 PRINTS Proline rich extensin signature 142 159 - -
Tsu08g01937 272 ProSiteProfiles Phytocyanin domain profile. 23 69 IPR003245 GO:0009055
Tsu08g01937 272 SUPERFAMILY Cupredoxins 22 71 IPR008972 -
Tsu08g01937 272 MobiDBLite consensus disorder prediction 205 220 - -
Tsu08g01937 272 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 69 271 - -
Tsu08g01937 272 MobiDBLite consensus disorder prediction 133 191 - -
Tsu08g01937 272 PANTHER BLUE COPPER PROTEIN 1 69 IPR039391 GO:0009055
Tsu08g01937 272 Gene3D - 22 98 IPR008972 -
Tsu08g01937 272 MobiDBLite consensus disorder prediction 230 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01937 Tsu-Chr8 24748120 24752792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01937 1 135 Phytocyanin Superfamily AT4G28365 34.043 1.30e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01937 - - cam:101497669 103.99