Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01930 ATGCAAGAATTCTCAAATGTCTCAACTCAACTAAAGAACTCACTATCCAAGGCACTAACAATTTTCTACCCTCTTTGTGGTAGAAGAAGTGATATCTTCTCAATCGATTGCAACGACGATGGCGCGATTTACTTGGAAGCTTCAATAAACATGGAAATGGAAGAGTTCTTAAGTCCACCAAAATTGGAATTAATAAACAAATTGCTTCCTTGTGAGCCAAACAAGACACAACCTTACAATGAAATCTTACCACAAATTTTAGTTCAAGTGAACATTTTCAAGTGTGGTGGGATAGCTATTGGTTTGTGCAATCTCCATACAATACTAGATGCATATTCTTGTAGTTTATTCATGAAAACATGGTCTTCTATTTGTAAAGGGTCAAATGATGAAATTTGTGAGCCAAATTTCTCAATTGCTTCTTCAATTTTCCCTCCAAGAAACACCTTTGGTGTTAGGGCTGGTGTGATGAATATTAACAAAGGATTAGAGATAGAAATCAAGTGCTCTACAAGAAGATTCTTGTTTGATAACAAATCAATTAATGACTTGAAAGTTGCGTCGATAAAAAACGACGGAATCAACACAAAATTACCAACAAGTTACAAAGTAGTTACTTCATTTATAAGTAAGCACATGATTGTAGCATGCATGAAGGAATTTTGTGATGAAAGCAAGAGGCCATTGGTAGTTTTACATGTTGTAGACATGAGGAGAAGGATGGGAGAGAGTTTCTTACAAAATTCTATTGGAAATTTAATATGGCCAGCATTAATGGTTTGTGAAAATGTCAACAAGGACACTAATATTAGTGATATGGTTAAAATTTTGGAAAATGAAATTGGAAAGATTAATGaagaattgtttttaaaattgaaaaatgatcCTAGTTTTTTATGGAGTGATGAGTGTGCTGAATTAATGCTTGAAGGTAtggaaaataaaaatccaatttcatTTGTGTTTACAAGTTGGGGAAATATGGGATTCAAAGAGATTGATTTTGGTTGGGGAAAGCCTTTATGGATAGCTCAAAGAGGTGGTACCAAAGAAACTATTCCAAATACAGTTGTGTTGATGGAAACATATGATGGAATTGAGGCATGGGTGACAATGGCTGATAAACATTTAGATGACTTGGAAAATGATACTGAATTCCTCAAATTTGCTTTGCTTAATCCTAATATTAATTTCAATCGTGTAGTAATGTAA 1212 0.3276 MQEFSNVSTQLKNSLSKALTIFYPLCGRRSDIFSIDCNDDGAIYLEASINMEMEEFLSPPKLELINKLLPCEPNKTQPYNEILPQILVQVNIFKCGGIAIGLCNLHTILDAYSCSLFMKTWSSICKGSNDEICEPNFSIASSIFPPRNTFGVRAGVMNINKGLEIEIKCSTRRFLFDNKSINDLKVASIKNDGINTKLPTSYKVVTSFISKHMIVACMKEFCDESKRPLVVLHVVDMRRRMGESFLQNSIGNLIWPALMVCENVNKDTNISDMVKILENEIGKINEELFLKLKNDPSFLWSDECAELMLEGMENKNPISFVFTSWGNMGFKEIDFGWGKPLWIAQRGGTKETIPNTVVLMETYDGIEAWVTMADKHLDDLENDTEFLKFALLNPNINFNRVVM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01930 403 Pfam Transferase family 6 386 - -
Tsu08g01930 403 Gene3D - 1 154 IPR023213 -
Tsu08g01930 403 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 401 - -
Tsu08g01930 403 Gene3D - 167 389 IPR023213 -
Tsu08g01930 403 PANTHER F21J9.9 1 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01930 Tsu-Chr8 24543313 24544524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01930 11 381 Monolignol Biosynthesis Gene Families AT5G48930 24.121 2.48e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01930 - - cam:101491503 702.59