Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01818 ATGGATGAAGGACAATCTAAAACACATACAGAGACTTTGGCTACTATTGGGTACCTTGCACCAGAGTATGGATCTAGTGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAAAAAACCAACAGATGATATGTTTGTTGCAGAACTAAGTTTGAAAACATGGATCAGTGGATCATTGCCTAATTCAATTATGGAGGTCCTAGATTCTAATTTAGTCCAACAATATGGGGAACAAATTGAtgacatatttacatatatgtCATCTATTTTTGGTTTAGCCCTGAACTGTTGTGAAGATTCACCTGAAGCAAGAGTTAATATGTCAGATGTTACTGCATCGCTAATCAAAATCAAGACTTTGGTTGTTGGCGCAAATAGGGCCTAG 417 0.3597 MDEGQSKTHTETLATIGYLAPEYGSSGIVSVKGDVYSYGIMLMEIFTRKKPTDDMFVAELSLKTWISGSLPNSIMEVLDSNLVQQYGEQIDDIFTYMSSIFGLALNCCEDSPEARVNMSDVTASLIKIKTLVVGANRA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01818 138 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01818 138 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 132 - -
Tsu08g01818 138 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 3 132 - -
Tsu08g01818 138 SUPERFAMILY Protein kinase-like (PK-like) 6 129 IPR011009 -
Tsu08g01818 138 Pfam Protein tyrosine and serine/threonine kinase 4 124 IPR001245 GO:0004672|GO:0006468
Tsu08g01818 138 Gene3D Transferase(Phosphotransferase) domain 1 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01818 Tsu-Chr8 22174830 22175424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01818 14 137 Receptor kinase-like Gene Family AT3G47570 37.600 6.62e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu08g01818 PK_Tyr_Ser-Thr 1.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01818 - K13420 mtr:MTR_0070s0020 243.047