Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01802 ATGGCAAAGAGTGAGGTGAAGCTTATTGGCAAATGGTCAAGTCCTTATGTGGCAAGGGTGAAGATTGCCCTTAACATCAAATCACTTGAATATGAAATTTTTGAAGAGAATGAAACCTTTAACCCCAAAAGTGATCTTCTTGTTCAATCTAACCCTGTTTATGGCAAAGTCCCAGTTCTCATTCACCAAGATAAACCCATTTGTGAGTCTCTTATCATTGTTGAATACATAGATGACACTTGGTCAAGTTCTCCTTCTATACTTCCCTCTGATTCTTATGATAGATCAGTTGCTCGATTCTGGGCTGCTTATATAGATCAAAAGTGGTTTCCTCCTATGCAAAGCATAATTACTGTTGAAAGAGAGGAGGAAAGGAAGCCATATTTTGAGGTAATGGAAGAAGTGGTTGAGAAGATGGAGGAAGCTTTTGTAAAATGCAGCAAAGGAAAGCAATTTTTTGGTGGGGATAAGATTGGTTATCTTGATATTGCATTTGGAAGCTTTTTGGGATGGCTTAGTGTGATAGAGCATGATTATGAAAGGAAAGTGTTGGTTGAAGAAAAGGCTCCTAATTTGGTAAAATGGGCTAAGAGATTTGTTGCTGATCCTGCTGTCAAGGGACTTATACCTGAGACTGAGAGACTTGTTAAACTTTCTAAAGCTCTTCAGATCAAATGGAGAGATGCTATTGGTAAGACATAG 702 0.3832 MAKSEVKLIGKWSSPYVARVKIALNIKSLEYEIFEENETFNPKSDLLVQSNPVYGKVPVLIHQDKPICESLIIVEYIDDTWSSSPSILPSDSYDRSVARFWAAYIDQKWFPPMQSIITVEREEERKPYFEVMEEVVEKMEEAFVKCSKGKQFFGGDKIGYLDIAFGSFLGWLSVIEHDYERKVLVEEKAPNLVKWAKRFVADPAVKGLIPETERLVKLSKALQIKWRDAIGKT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01802 233 SUPERFAMILY Thioredoxin-like 6 110 IPR036249 -
Tsu08g01802 233 SUPERFAMILY GST C-terminal domain-like 87 219 IPR036282 -
Tsu08g01802 233 CDD GST_C_Tau 93 222 IPR045074 GO:0004364|GO:0006749
Tsu08g01802 233 Pfam Glutathione S-transferase, N-terminal domain 5 78 IPR004045 -
Tsu08g01802 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Tsu08g01802 233 Gene3D - 88 229 - -
Tsu08g01802 233 SFLD Main.3: Omega- and Tau-like 2 226 IPR045073 -
Tsu08g01802 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 219 IPR045073 -
Tsu08g01802 233 PANTHER GLUTATHIONE S-TRANSFERASE U17 4 219 - -
Tsu08g01802 233 SFLD Glutathione Transferase (cytosolic) 2 226 IPR040079 -
Tsu08g01802 233 CDD GST_N_Tau 6 81 - -
Tsu08g01802 233 Gene3D Glutaredoxin 1 87 - -
Tsu08g01802 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 219 IPR010987 -
Tsu08g01802 233 Pfam Glutathione S-transferase, C-terminal domain 101 203 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01802 Tsu-Chr8 22019586 22021183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01802 1 222 Glutathione S-transferase Gene Family AT1G10370 57.848 1.19e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01802 K00799 - cam:101508281 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01802 08 22019586 22021183 Tsu08g01802 08 22019586 22021183 ECH