Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01798 ATGAACGAAGATTTCGAATTCGCCGGAGCTGAAGGTAATCCAATTCTCAAGGCCGGTCAAGAGAAGGACATTAGTAAGCAAGGTTTGAAGAAGAAGCTTCTTAAAGAAGGTGAAGGTTGGGATACTCCTGATGTTGGCGATGAAATTTACATTCACTATATTGGAACCTTGCTTGATGATAAAGCTCAAGAAGTAGCTGCAAAATTCAATTCATGCAATCCTTTTTTCACAATTATCATAAAGACTTATCATTTGATACAAAGTCAGCTGTGTGTACCAAGTTTAAAAGGTGTTATTGAGAGCAAAGACAAGTATGTGATGCTGCAGATAGGAAAAATATCATGA 345 0.371 MNEDFEFAGAEGNPILKAGQEKDISKQGLKKKLLKEGEGWDTPDVGDEIYIHYIGTLLDDKAQEVAAKFNSCNPFFTIIIKTYHLIQSQLCVPSLKGVIESKDKYVMLQIGKIS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01798 114 PANTHER PEPTIDYLPROLYL ISOMERASE 1 60 - -
Tsu08g01798 114 Gene3D - 5 98 IPR046357 GO:0003755
Tsu08g01798 114 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 60 - -
Tsu08g01798 114 SUPERFAMILY FKBP-like 23 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01798 Tsu-Chr8 21951451 21952545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01798 10 85 Calmodulin-binding Proteins AT5G48570 48.235 2.88e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01798 K09571 - gmx:100803189 89.3521