Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01796 ATGACAATCAACTTTGTCCTACACCAGCTCAGATCTTGTGGAGTTCTAGAAGCTGTTAGAATTTCAAGGGCTGGATATCCTACTCGAATGAACCATCAAGAGTTTTCCAGATGGTACGAGTTTCTGCTTTCCGGGACTGATGTACCTCGGGATCTGTTGAGCACCTCAGTCGCTGTTTTGCAAAAGTTTAATATCCCTTCTGAAATGCACCAAATTGGTGCCTTGgagaataagagaaaaaagtttttgcAGGGAACTCTTCGGATTCAAAAATGCTTCTGTGGTCATCAAGCTCGTAGTTATTTCTGTGAACTTAAGAATGGAGCGACAATATTACAATCATTTATTCGTGGAGAAACTACAAGAAGGAAACATGGTCTTTTGTTGAAATCTTCCATAACCATTTATTCTAAAAAACTTGAGGAGATTCATACAATCATATTACTCCAATCTGTGATTTGGTTATTATCTCATGTTAACATGCCAGAAGTTAAGGATTTGTCCAAAGAGCTGGTTGCGAACATGCCTTCAGCTTTACAAGAACTCCAGAACCGGGTATACAGCGCTGAAGCAATTGTCAAGCAAAAGGAAGAGGAAAATACTGAGTTGAGGGAAAAGGTGAAACAATCTGAAAGAAAGAGAGTTGAATATGAAGCGAAGATGAAGTCAATGGAGGAGGCATGGCAAAAGCAGATGGCATCTTTGCAAGTTGCGTTAAGAATTAGACTTGATGCGAAAGATAAAAAATGCATCGTTAACATTGGTGtcttttgcttaaaaaagGTCAATTCCTATTGGCAGTATAAACTGAAATGGTGA 819 0.3748 MTINFVLHQLRSCGVLEAVRISRAGYPTRMNHQEFSRWYEFLLSGTDVPRDLLSTSVAVLQKFNIPSEMHQIGALENKRKKFLQGTLRIQKCFCGHQARSYFCELKNGATILQSFIRGETTRRKHGLLLKSSITIYSKKLEEIHTIILLQSVIWLLSHVNMPEVKDLSKELVANMPSALQELQNRVYSAEAIVKQKEEENTELREKVKQSERKRVEYEAKMKSMEEAWQKQMASLQVALRIRLDAKDKKCIVNIGVFCLKKVNSYWQYKLKW 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01796 272 Gene3D - 81 131 - -
Tsu08g01796 272 Coils Coil 179 227 - -
Tsu08g01796 272 ProSiteProfiles Myosin motor domain profile. 1 97 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu08g01796 272 PANTHER MYOSIN 4 241 - -
Tsu08g01796 272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 129 IPR027417 -
Tsu08g01796 272 Pfam Myosin head (motor domain) 4 74 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu08g01796 272 ProSiteProfiles IQ motif profile. 105 134 IPR000048 GO:0005515
Tsu08g01796 272 PANTHER MYOSIN-3 4 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01796 Tsu-Chr8 21932479 21938392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01796 4 239 Myosins gene family AT5G54280 42.336 4.71e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01796 K10357 - gmx:100802614 313.538