Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01795 atgaaggaGGTAATTTGTAATTCATTGAAAGGAGTAACACCGGTGGTGCTAATGGTAGTTTGCCAGATTGCATATGCTGCTGTGAATATAATGTACAAGCTGGCCATAAATGATGGAATGAGTATGAGGGTAGCTGCTGCCTACCGCCTCACCTTTGCGGCGGCTTTCACTATTCCCCTTGCTCTTTTCTTTGATAGGAAGAAGAGATCAAAGTTTACTTGGAAGGTTTTTTATATGACATTTCTTTGTGGACTATTTGGGGGAAGTTTACTTCTAAACCTTTACGGCATGGGACTGACTTTGACTTCAGCAACGTTTATGCAGTCCATGTTCAACCTTGTTCCAATAGTTACCTTCATCATGGCCATATCTTTCAG 377 0.4058 MKEVICNSLKGVTPVVLMVVCQIAYAAVNIMYKLAINDGMSMRVAAAYRLTFAAAFTIPLALFFDRKKRSKFTWKVFYMTFLCGLFGGSLLLNLYGMGLTLTSATFMQSMFNLVPIVTFIMAISF 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01795 125 Pfam EamA-like transporter family 14 123 IPR000620 GO:0016020|GO:0016021
Tsu08g01795 125 PANTHER WAT1-RELATED PROTEIN 11 124 IPR030184 GO:0016021|GO:0022857
Tsu08g01795 125 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 124 - -
Tsu08g01795 125 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 11 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01795 Tsu-Chr8 21891196 21904331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01795 15 125 Nodulin-like Gene Family AT1G25270 40.541 3.06e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01795 - - cam:101515687 158.303