Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01789 ATTGGAAAAGCTAAATTGGGGATTAGCGGAGGGAAAGGCCAAGATAATAGGAACATTAATTAGCATTAGTGGGGCAATGCTAATGATATTTTACAAAGGATTAGAAGTTGATATTTGGAATTCCAATATAAACCTTATGCATCCACATCATAATCAAAATGGGCTTATGGAACCACTGCATACTGACTATAGTAATAATAAACTACTGGGAATTCCATGTGCTATAGGAAGTTGTTGCTCTTTTTCTTTGTGGTTAATTATCCAGACTAAATTGAATGAAGAATATCCGTGCCATCGTTCAAGCTCAGCTTTGATGTCAACCATGGGAGCAATTCAGGCCATTGTTTTTGCTCTTTGTGTTGATAGAGATTGGACGAAATGGAAGCTCGGTTATGATATCAGACTTCTCACTATTGTTTATTCGGGAATTGTAGGTTCTGGAATTGTGATTGTTGTTATTGCTTGGTGCATAAAAATGAGAGGTCCTATATTTGCATCTACTTTCAATCCTCTTCAGCTTTTACTTGTGGCTATCTCTGCTTATTTGTTATTGGATGAGAAGTTATATTTAGGAAgTGTCTTTGGAGCAGTGTTGATTGTATGCGGCATATATGCAGTGCTTTGGAGCAAGAGCAgagaaatgaaaaagaagattaaGTTATTATCATCAGAGATCAATATTAAGTCTGAAGATCCTCACAACTGA 706 0.3541 LEKLNWGLAEGKAKIIGTLISISGAMLMIFYKGLEVDIWNSNINLMHPHHNQNGLMEPLHTDYSNNKLLGIPCAIGSCCSFSLWLIIQTKLNEEYPCHRSSSALMSTMGAIQAIVFALCVDRDWTKWKLGYDIRLLTIVYSGIVGSGIVIVVIAWCIKMRGPIFASTFNPLQLLLVAISAYLLLDEKLYLGSVFGAVLIVCGIYAVLWSKSREMKKKIKLLSSEINIKSEDPHN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01789 234 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 1 231 - -
Tsu08g01789 234 PANTHER WAT1-RELATED PROTEIN 1 231 IPR030184 GO:0016021|GO:0022857
Tsu08g01789 234 SUPERFAMILY Multidrug resistance efflux transporter EmrE 127 212 - -
Tsu08g01789 234 Pfam EamA-like transporter family 69 207 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01789 Tsu-Chr8 21856420 21858041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01789 1 215 Nodulin-like Gene Family AT1G25270 40.000 4.80e-57 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01789 - - cam:101515687 338.191