Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01783 ATGGAGGCATCTTGGTTGATAATCATATTACTACTTGTTCTTCTATGTCTTTCAATGCTTATTATCATCACAAGAATAAGATCCTCCATTAACCTCCCTCCAGGACCTCTCTACATTCCTTTCATTACCGACATCCTCTTGCTGCCAAAAATATCATTCTCACAACTCAAACCAATTCTTCACGACCTTCATGCCAAACATGGCCCTATAATCTCGTTCCACTTTTGGTCTACTCCTCATATTTTCATATTCGATCGTTTCCTCGCTCACAAAGCCTTAATCCAAAATGCTTCCGTTTTTGCCAACCGCCCAAAATCCATAAACAATAATATCCAACTTAATATCACATCCTCTTGCTACGGCTCCACGTGGCGTGTTCTTCGCAATAACCTCACATCCACGGTGCTTCACCCATCACGATTCAAATCATTTTCCGAAACTCGCACGCGTGTATTAGAAACGCTTCTAAATGAATTGAAGTTTGAAGCTAAAGCAATGAATAATTCTGTTAAGCTCACCAACCACATTCACCACGCCATTTTTTCCTTACTAGTTTTCATGTGTTTTGGTGAAAATGTTGACAAcaagaaaatagaaaacataaaaaacattcAGAAATGTTTGATTTCTAGCTCCGGAAAATACAGTGCACTAAATTTCTACCCAAAAATTGTATCTCGCGTGTTATTCCGAAAACGTTGGCAAGAATTGTTGCAACTTCGGAAATTCCAAAATGATTTGATGGTTGAACTAATACAGTCCAGAAaggaaataattgaaaataataatcatgAAGACGGTGATGATGGATGTGTTGTTTGTTACGTGGATATTTTGTTGAACTTGCAATTGCCCGAGGAAAAACGAAAGCTTGATGAGGGTGAACTTGTTGCGCTCTGTTCAGAGATTCTCACTGCTGGAACAGATACAACTTCAACTACGATTGAGTGGATTATGGCAAATTTGGTGAAATACAAACACATGCAACAGAGGCTAGTGgaggaaattgaagatgtaGTTGGCAATAGAGAGGAAATGGTAGTAAGAGAGGAAGACTTAGAGAAATTACCATATTTGAAGGCTTTGATTTTGGAAGGATTAAGGCGTCATCCTCCTACTCACTATGCAATTCCACATGCAGTGACCAAGGATGTTATTTTGAATGGTTATTTTATACCTAAAAACGGGACTGTGAATTTTATGGTGGCAGATATAGGATTGGATCCAACGGTTTGGAAGGATCCTATGGTGTTTAAGCCAGAGCGATTTTTAAGAGATGAATCAAGTAGTAATATATTAGAAGCATATGATATTAGTGGTAAAAAAGAGATAAAGATGATGCCATTTGGGGCTGGAAGGAGGATTTGTCCAGCTTATCGATTAGCAATGCTCCATTTAGAATACTTTGTTGCAAATTTGGTTTTGAACTTTGAGTGGAAGACTTTATTATCCACAGAAAATGTTGATTTGTCTGAAAAACAAGAATTCACTATGGTGATGAAACATCCACTGCAAGCTCAAATTTCTCAAAGGAATCAGATTCATCAATAA 1551 0.3643 MEASWLIIILLLVLLCLSMLIIITRIRSSINLPPGPLYIPFITDILLLPKISFSQLKPILHDLHAKHGPIISFHFWSTPHIFIFDRFLAHKALIQNASVFANRPKSINNNIQLNITSSCYGSTWRVLRNNLTSTVLHPSRFKSFSETRTRVLETLLNELKFEAKAMNNSVKLTNHIHHAIFSLLVFMCFGENVDNKKIENIKNIQKCLISSSGKYSALNFYPKIVSRVLFRKRWQELLQLRKFQNDLMVELIQSRKEIIENNNHEDGDDGCVVCYVDILLNLQLPEEKRKLDEGELVALCSEILTAGTDTTSTTIEWIMANLVKYKHMQQRLVEEIEDVVGNREEMVVREEDLEKLPYLKALILEGLRRHPPTHYAIPHAVTKDVILNGYFIPKNGTVNFMVADIGLDPTVWKDPMVFKPERFLRDESSSNILEAYDISGKKEIKMMPFGAGRRICPAYRLAMLHLEYFVANLVLNFEWKTLLSTENVDLSEKQEFTMVMKHPLQAQISQRNQIHQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01783 516 Gene3D Cytochrome P450 26 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 Pfam Cytochrome P450 33 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 510 - -
Tsu08g01783 516 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Tsu08g01783 516 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01783 516 PANTHER CYTOCHROME P450 8 510 - -
Tsu08g01783 516 SUPERFAMILY Cytochrome P450 33 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01783 Tsu-Chr8 21768699 21770249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01783 5 506 Cytochrome P450 AT1G64940 48.350 2.10e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01783 K24184 - gmx:100805244 562.762