Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01752 ATGACTTTTTTCTTATACTCTCTCCTTTTGCTCCTTCCTCTTTGCTTTTCTTCATTTACTATGGGAGCCACTCTACAACAAGATGAAGTAAAAGCTCTTAAAGACATAGGTAAAACACTTGGAAAGATGGATTGGGATTTCAGCGTTGATCCATGTAGCGGTGGCAATAACTGGATATCAACTGCTCAACTACAAGGTTCTGAAAATGCTGTTACATGCAATTGCTCTTATCAAAATAACACTCTCTGCCATGTTGTTAGCGTTGTTCTAAAAGCACAAAACCTTTCGGGTACTCTTCCACCTGATCTTGTAAGATTGCCTTTTCTCCAAGAAATTGACCTAACCCTCAACTATCTTAATGGTACAATTCCCAAACAATGGGCCACATTAAATCTTGTAAACATTTCCTTCTATGGAAATCGTCTATCCGGTCCAATTCCAAAGGAGTTTGGAAAAATCACCACTCTCAAAAGCTTGGTATTGGAGTTCAACCAATTATCTGGAAATCTTCCTCCAGAACTTGGGAGTCTTTCCCAGATTGAAAGACTGCTTCTTTCCTCCAACAATTTCACTGGAGCGTTACCTGCAACATTTGCTAACCTCACTGCATTGAAGCAATTTCGAATTGGTGACAGTCAATTATCTGGAACAATACCCAACTTTATACAGAACTGGATACATCTTACGATGCTCGTGATCCGAGGGAGTGGTTTGAGTGGGCCAATTCCTGCTGGAATTTCACTTTTGAAAAATCTCACTGACTTGACTATTACTGATTTGAATGGATCTGATTCACCATTTCCAAATCTTGAAAGCATGTCAAGGTTGTCAAAATTGGAATTGAGAAGTTGCAATATCATTGGAGCATTGCCTGATTATCTTGGAAAGTTAATTAATCTGAAAGTGATAGAACTCAGCAACAACAAATTAAGTGGACAAATCCCCATGAGCTTCAATGATCTAAAGAACATGTATTTGCTATTTTTATCCAAGAATCAGTTGTCTGGACCGCTGCCTGACTGGATATATAAACCAGATTTTGTTGATCTGTCGTATAACAATTTCACTATAACGAAATTTGAGCAGCAGACTTGTCAACAAGGAAGTGTTGCTAACTTGTTCTCCCCTTCCATTTTTAATCTCCTCAGAGGAAATATTTCATGTTTGGAAAACTATAATTGTCCTAAAACTTGGTACTCTCTCTATATAAATTGTGGTGGAAAGAGCATAACATTTGATGGAAATAAGACATACGATGATGATTCAAGTGAGATGGAACCAGCAAGGTATCGTCAATTTGGAACGAACTGGGCACTAATAACTTCTGGTCACTTCTTTGATAGTGGGCGCCCTGACTACTATAAATGGTCTAATACAACAAAGCTTGCTGTGGACAATGATGCTGAACTTTACATGGATGCACGCGTTTCTCCAAATGCTCTAACTTATTATGGATTCTGCCTTGGAAATGGAAACTACACCGTCAATCTCCATTTTGCAGAAATAATGTTCAGTGATGATAAAACATTTAGCAGCATTGGAAGGCGTGTATTTGACATCTACATCCAGAGAAAGTTGGTGGTGAAGGATTTCGATATTGTAAAAGAGGCAGGTGGCATTCGTAAGGaagtcattaaaaaatttactgCTGGTGTGACTAGTAATGCATTGGAGATTCGATTATATTGGGCGGGGAAAGGAACAACTACTATACCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCAGTTGAACCCGATTTTACACCCCCATCGGAAAATAGTAGAAGCATATCGGCAGGGGTTGTGGCTGCAATTGTGGCTGCAGGAGCAATTGTTATCATCTTGATAATTGGCATAATGTGGTGGAAGGGTTGTTTAAGACTGAAATGTTTAAGAGCAAGAGCAGAGAAAAAGGCTTCACAAAGTGGCTTATTCACCTTACGACAAATCAAATCTGCAACAAACAACTTTGATGAATCTTTCAAGATTGGAGAAGGAGGATTTGGTCCAGTTTACAAGGGTGTTCTATCAGATGGCACAATAGTAGCGATTAAGCAGCTATCTTCTAAATCAACACAAGGATCTCGTGAATTTATTAATGAGATAGGCATGATTTCTACTTTACAACACCCTAATCTTGTCAAGCTATATGGCTTCTGCATGGAAGATGATCAGTTGTTGTTGATATATGAATATATGGAAAACAATAGCCTTGCTCATGCTTTATTTGCCAAGAAAGAAGACCTAGAAAATCGTCAATTGAGATTGGATTGGAAAACTAGGAAGAGAATTTGTATTGGCATTGCTAAAGGTTTAGCTTACCTTCACGGAGAGTCAAAAATAAAGATCATTCATAGGGACATCAAGGCCACCAATGTATTGCTAGATAAAGATCTCAGCCCCAAGATATCGGATTTTGGCTTGGCAAAGCTCAATGAAGACGACAAAACCCACATGAACACCAGAATAGCTGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGCTATTTGACGGACAAAGTAGATGTTTATAGTTTTGGAATTGTTATGTTGGAAATTGTTAGTGGAACCAACAACACTGTTAGCCATCCTCAGGAGGAATGCTTCTCTCTTCTTGATTGGGTGCACCTCTTGAAGGAAAAAGATGATCTAATGGAACTTGTTGATCGGAAATTAGGTCAAGATTTAAAGAAAGAGGAGGTAAGAATGATGATCAACGTGGCTCTTTTATGCACTAATTTTTCGCCATCGCTCAGGCCCTCCATGTCTTCAGTAGTAAGCATGCTTGAAGGAAAAACAAATGTTCAAGAAGTGGTGGCAGAATCAACTGAGGTATTGGATGataagaaatacaagatgatgCAACAATATTACAAACAAAAAGGAGAAAATAGCACAAGTGAGGCTCAAAGCATCCAAACAGATGACTCTCATGCCTTTATATATGATACTGATTCTTCTATATGGGAACCCAGAAATTAG 3000 0.3827 MTFFLYSLLLLLPLCFSSFTMGATLQQDEVKALKDIGKTLGKMDWDFSVDPCSGGNNWISTAQLQGSENAVTCNCSYQNNTLCHVVSVVLKAQNLSGTLPPDLVRLPFLQEIDLTLNYLNGTIPKQWATLNLVNISFYGNRLSGPIPKEFGKITTLKSLVLEFNQLSGNLPPELGSLSQIERLLLSSNNFTGALPATFANLTALKQFRIGDSQLSGTIPNFIQNWIHLTMLVIRGSGLSGPIPAGISLLKNLTDLTITDLNGSDSPFPNLESMSRLSKLELRSCNIIGALPDYLGKLINLKVIELSNNKLSGQIPMSFNDLKNMYLLFLSKNQLSGPLPDWIYKPDFVDLSYNNFTITKFEQQTCQQGSVANLFSPSIFNLLRGNISCLENYNCPKTWYSLYINCGGKSITFDGNKTYDDDSSEMEPARYRQFGTNWALITSGHFFDSGRPDYYKWSNTTKLAVDNDAELYMDARVSPNALTYYGFCLGNGNYTVNLHFAEIMFSDDKTFSSIGRRVFDIYIQRKLVVKDFDIVKEAGGIRKEVIKKFTAGVTSNALEIRLYWAGKGTTTIPFGSVYGPLISAISVEPDFTPPSENSRSISAGVVAAIVAAGAIVIILIIGIMWWKGCLRLKCLRARAEKKASQSGLFTLRQIKSATNNFDESFKIGEGGFGPVYKGVLSDGTIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKEDLENRQLRLDWKTRKRICIGIAKGLAYLHGESKIKIIHRDIKATNVLLDKDLSPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTDKVDVYSFGIVMLEIVSGTNNTVSHPQEECFSLLDWVHLLKEKDDLMELVDRKLGQDLKKEEVRMMINVALLCTNFSPSLRPSMSSVVSMLEGKTNVQEVVAESTEVLDDKKYKMMQQYYKQKGENSTSEAQSIQTDDSHAFIYDTDSSIWEPRN 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01752 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 72 287 - -
Tsu08g01752 999 SUPERFAMILY L domain-like 79 356 - -
Tsu08g01752 999 Gene3D Ribonuclease Inhibitor 32 194 IPR032675 -
Tsu08g01752 999 Gene3D Ribonuclease Inhibitor 195 261 IPR032675 -
Tsu08g01752 999 ProSiteProfiles Protein kinase domain profile. 660 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01752 999 SUPERFAMILY Protein kinase-like (PK-like) 645 936 IPR011009 -
Tsu08g01752 999 Pfam Protein kinase domain 663 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01752 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 287 343 - -
Tsu08g01752 999 CDD STKc_IRAK 666 937 - -
Tsu08g01752 999 Gene3D Ribonuclease Inhibitor 262 375 IPR032675 -
Tsu08g01752 999 Pfam Malectin domain 400 584 IPR021720 -
Tsu08g01752 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Tsu08g01752 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 287 343 - -
Tsu08g01752 999 Gene3D - 398 588 - -
Tsu08g01752 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 378 973 - -
Tsu08g01752 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 378 973 - -
Tsu08g01752 999 Gene3D Transferase(Phosphotransferase) domain 1 736 962 - -
Tsu08g01752 999 SMART serkin_6 660 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01752 999 Gene3D Phosphorylase Kinase; domain 1 630 735 - -
Tsu08g01752 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 72 287 - -
Tsu08g01752 999 Pfam Leucine rich repeat 275 334 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01752 Tsu-Chr8 21275030 21284462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01752 19 985 Receptor kinase-like Gene Family AT1G53420 51.222 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu08g01752 Pkinase 2.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01752 - - gmx:100786496 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01752 08 21275030 21284462 Tsu08g01752 08 21275030 21284462 ECH