Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01746 ATGCCAGGGAATAAATACAACGGTGATTCAAATCATATACCAGGTCGTGTAGAAAGGTTATTAAGAGAAAGAGAGTTAAGGAAAAGTGGAAATAGAGGAATTCAATCCAATAATGAACAATTGTTGGGTGATGAATACTTGGAGCAGGAAGATCATGTTGAGAaagtatcatcatcatcatcaataattgaGAGACAAGAAAATGATGATCATGGGAAATATAGACAGAGACTTTTGGTTGTGGCAAACAGGTTACCCGTGTCGGCAATAAGGAAAGGTGAAGATTCTTGGTCTTTGGAGATCAGTGCAGGTGGCCTAGTTAGTGCTCTCTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCTGGAGTGAATGTTCCAGACGTGGTTGGACAGAAGGCACTCACTAAAGCATTAGCCGAAAAgAGGTGTATTCCTGTATTTCTGGATGAAGATATTGTTCATCAATATTACAATGGTTATTGCAACAACATCTTATGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCAACAACTCGCAGTTTCCAATCTCAATTTTTGGCCTATGAGAAAGCGAATCAAATGTTTGCCGATGTTGTGAACCAACACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTCCCAAAATGTTTAAAGAAATATAACAGTAAAATGAAAGTCGGGTGGTTTCTTCACACTCCTTTTCCTTCTTCTGAAATTCATAGGACGCTGCCTTCTCGTTCTGAGCTCCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACGTATGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAGGGTACACCTTATGGGGTCGAGTATCAAGGGAAGCTAACTCGAGTTGCTGCTTTTCCAATAGGGATAGACTCGGAACGATTTATACGTGCGCTAGACCTTGCTCCGGTGCAGGAGCATATGAAAGAATTGCAAGAAAGATTCAAAGGCAGAAAGGTAATGTTAGGCGTTGATCGGCTTGATATGATTAAAGGAATTCCTCAAAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAAAATGCTTATTGGCGCGATAAAGTAGTTTTGCTTCAAATTGCTGTCCCAACAAGAACAGATGTTCCTGAATATCAAAAGCTTACAAGTCAGGTTCATGAAATTGTTGGTCGCATCAATGGAAGATTTGGATCATTGACTACTGTTCCTATACATCACCTGGATCGCTCTCTTGACTTTCATGAACTATGTGCTTTGTATGCAGTTACTGATGTAGCGCTAGTCACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCGTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCTCAGTCTCTTGGTGCTGGGGCAATTCTTGTCAATCCGTGGAACGTTACAGATGTTGCTACTGCAATTGGAAGAGCTCTGAATATGTTACCTGCGGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTGAAATCCCACACTGCACAAGAATGGGCAGGAACGTTTGTAAGTGAACTAAATGATACTGTTATTGAGGCACAACTAAGGACAAGACAAGTTCCACCTAGGCTTCCAACTGAAATTGCAATCAGACGTTATCTGCACTCAACTAATAGATTGCTCATTTTGGGATTCAATGGAACTTTAACTGAACCAGTTGAGAAAACTGGAGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAATTGAGACAACCCTTGACAGCACTTTGCAGTGATCCAAATACCACAGTAGTTGTTCTCAGTGGAAGTGGTAGAAAAGTCCTAGATGATAACTTCAAAGAATACGACATGTGGTTGGCAGCAGAGAATGGGATGTTTTTACAACCTTCAAAGGGTGAATGGATGACAACAATGCCAGAGCATCTGAATATGGAATGGGTTGACAGCGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCGCGGTCACATTTTGATTTTGAGGAGAGGGAAACTTCACTTGTTTGGAATTACAAATATGCAGATGTTGAGTTTGGTAAACTTCAAGCAAGAGACATGCTGCAACATCTCTGGACAGGTCCGATTTCTAATTCGTCAGTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAAGTTAGAGCCGTTGGTGTTACAAAGgGAGCAGCTATTGATCGCATCCTGGGTGAGATAGTTCATAGCAAATCCATGACATCGCCAATTGATTATGTTCTTTGTATAGGACATTTTCTGGGGAAGGACGAAGATCTTTATACCTTTTTTGAGCCAGATCTTCCATCTATTGGTGTGAGTCTTCCGCGAAGTAAGTCAACAACAGAAGCAGTTAAATTTCCTGCTGAGAAGAAGCCAGCTTTAAAGATCCCAGCTAGCAGTAAAAATGGACCAAAATCATTATCTCAAAATAAGGTACAAAAACCAGTTTCAATTTCTGAtcagaagaaaacaaataatcaaatttGCAGTTCACCACGACGCCCTGCTCAAGAAAATACATCATGGAATGTCCTTGACCTCAAGAAAGAGAATTACTTCTCATGCGCTGTTGGGAGAAACCGAACAAATGCTCGGTATACTCTTGCTTCACCAGATCATGTTGTAGAGTTTCTGATGGAACTAGCAGATGCATTACCACACTCTTTACTACAAAGTTaa 2763 0.401 MPGNKYNGDSNHIPGRVERLLRERELRKSGNRGIQSNNEQLLGDEYLEQEDHVEKVSSSSSIIERQENDDHGKYRQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDVVGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFLAYEKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLAPVQEHMKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTDVATAIGRALNMLPAEREKRHKHNFLHVKSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPRLPTEIAIRRYLHSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPELRQPLTALCSDPNTTVVVLSGSGRKVLDDNFKEYDMWLAAENGMFLQPSKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNSSVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYTFFEPDLPSIGVSLPRSKSTTEAVKFPAEKKPALKIPASSKNGPKSLSQNKVQKPVSISDQKKTNNQICSSPRRPAQENTSWNVLDLKKENYFSCAVGRNRTNARYTLASPDHVVEFLMELADALPHSLLQS 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01746 920 MobiDBLite consensus disorder prediction 822 864 - -
Tsu08g01746 920 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 77 542 IPR012766 GO:0003825|GO:0005992
Tsu08g01746 920 CDD HAD_TPP 575 794 - -
Tsu08g01746 920 Gene3D - 664 746 - -
Tsu08g01746 920 SUPERFAMILY HAD-like 574 909 IPR036412 -
Tsu08g01746 920 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 50 909 IPR001830 GO:0003824|GO:0005992
Tsu08g01746 920 Gene3D Glycogen Phosphorylase B; 324 527 - -
Tsu08g01746 920 MobiDBLite consensus disorder prediction 829 864 - -
Tsu08g01746 920 CDD GT20_TPS 77 542 IPR001830 GO:0003824|GO:0005992
Tsu08g01746 920 Pfam Glycosyltransferase family 20 77 542 IPR001830 GO:0003824|GO:0005992
Tsu08g01746 920 Pfam Trehalose-phosphatase 580 799 IPR003337 GO:0003824|GO:0005992
Tsu08g01746 920 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 50 909 - -
Tsu08g01746 920 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 544 - -
Tsu08g01746 920 Gene3D Glycogen Phosphorylase B; 68 323 - -
Tsu08g01746 920 Gene3D - 577 760 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01746 Tsu-Chr8 21157730 21176600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01746 1 911 Trehalose Biosynthesis Gene Families AT1G78580 76.752 0.0 1446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01746 K16055 - gmx:100797320 1578.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01746 08 21157730 21176600 Tsu08g01746 08 21157730 21176600 ECH