Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01735 ATGACTCAGAAAATTCATCTCAATAAGGATTCGAAAGAGTTGGAATTTTTCACCGAGTACGGGGAAGCCAACAGATATAAGATTATTGAGATTATTGGAAAGGGTAGTTATGGAGTTGTTTGTGCGGCAATTGACACGCACACCGGGGAAAAGGTCGCAATAAAGAAGATTCATGATGCTTTTGAGCATATCTCTGATGCTGTTAGAATCCTCCGTGAAGTCAAGTTGCTAAGACTTTTAAGACACCCTGATATTGTTGATATTAAGAGGATTATGTTGCCGCCTTCTAAGAGAGAGTTTAAAGATATTTATGTGGTCTTTGAGCTCATGGAGTCTGATCTCCATCAAGTTATCAAAGCTAATGATGACTTAACTCGTGATCACCAtcagttttttctttatcaGATGCTACGTGCGTTAAAGTATATGCATTCGGCTAATGTGTACCACAGAGATCTTAAGCCCAAGAATATATTGGCAAATTCAAACTGCAAACTCAAAATCTGTGATTTTGGACTTGCAAGAGTTGCATTTAATGATGCCCCAACATCGATATTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCCCCAGAGCTTTGTGGATCATTCTCTTCTAAGTACACACCTGCAATTGATATTTGGAGCATTGGATGCATTTTTGCCGAGGTGCTGTTGGGAAAACCATTGTTTCCTGGTAAAAGTGTCGTGCATCAGTTAGATTTGATTACTGACCTTCTTGGGACACCATTGCCTGAAACTATTGCAGGAGTTAGAAATGATAATGCAAGGAAGTACTTGTCTAGAATGCGGAAGAAAACTCCTGTGCCATTTGAACGAAAATTCCCAAATGCTGATCCATTGGCACTTCGCCTTTTGCAAAGGCTTTTAACATTTGATCCAAAGGATCGACCGACTGCCGAACAGGCACTAGCTGATCCTTACTTCAAGGGCTTGGCAAAAGTTGAGAGAGAACCATCATGTAAGCCAATCTCAAAATTGGAATTTGAGTTTGAGAGGAGACGGATAACAAAGGACGATGTTAGGGAGCTAATGTATCGGGAAATACTGGAATATCATCCTCAATTGCTCAAAGATTACATGAATGGAATTGAAGGCGCCAATTTCCTCTATCCTAGTGCAATTGATCAATTAAGAAAGCAATTTGCTCATCTTGAGGAAAATGATGGTAAAAGTGGACCAGTGCTTCCGACTGAAAGAAAGCATGTCTCGCTTCCACGGTCCACTATTCACTCTAGTTCAATTCTTCCAAGTTACCAGTCAACCCTTGTTTTGAATGAGAACAAGAAAATGGTAGAAGAGACGTCTAAGGGTTTGAGAGCAGTAGTTGAAAATTCTGGATATCAAACAATAGGCATACAGCCTCCACCACGAGTGCCAGCTAAGCCAGGCAGAGTTGTTGGCCCGGTTCTACACTATGAATATGCGAGAATAATAAAATCTTCTAACGACCCAAGGGTAGTTTACCAAAATACTACTCAAGCAGTCTCAAGTCACGATGTCTTTAGAACCCATCCCCAAAACCATAAGACTACCTCAGATATACACAAGGACTTTTCACAAGGCAAGAATCAATTCCCATCCCAACAGTCAGACTTACAAGCCAAACCAACCACTTATTTGAACAATAACCCATACTGCCGACAAAGCAATAACAATAACCTAAATGATATTGTAATAGCTTATGATGCCAATTTGATGCGGGCACAATCTCACCTTGGTGTAGTTGATGCTGCAGCAGTAGCGGTTGCCACTCACAGTCACAGGTATTCAAGGAGTATCCAGTATAGTTTGTCCTAG 1824 0.4046 MTQKIHLNKDSKELEFFTEYGEANRYKIIEIIGKGSYGVVCAAIDTHTGEKVAIKKIHDAFEHISDAVRILREVKLLRLLRHPDIVDIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRDHHQFFLYQMLRALKYMHSANVYHRDLKPKNILANSNCKLKICDFGLARVAFNDAPTSIFWTDYVATRWYRAPELCGSFSSKYTPAIDIWSIGCIFAEVLLGKPLFPGKSVVHQLDLITDLLGTPLPETIAGVRNDNARKYLSRMRKKTPVPFERKFPNADPLALRLLQRLLTFDPKDRPTAEQALADPYFKGLAKVEREPSCKPISKLEFEFERRRITKDDVRELMYREILEYHPQLLKDYMNGIEGANFLYPSAIDQLRKQFAHLEENDGKSGPVLPTERKHVSLPRSTIHSSSILPSYQSTLVLNENKKMVEETSKGLRAVVENSGYQTIGIQPPPRVPAKPGRVVGPVLHYEYARIIKSSNDPRVVYQNTTQAVSSHDVFRTHPQNHKTTSDIHKDFSQGKNQFPSQQSDLQAKPTTYLNNNPYCRQSNNNNLNDIVIAYDANLMRAQSHLGVVDAAAVAVATHSHRYSRSIQYSLS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01735 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 11 480 - -
Tsu08g01735 607 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Tsu08g01735 607 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01735 607 CDD STKc_TDY_MAPK 25 362 - -
Tsu08g01735 607 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01735 607 SUPERFAMILY Protein kinase-like (PK-like) 20 321 IPR011009 -
Tsu08g01735 607 Gene3D Phosphorylase Kinase; domain 1 41 363 - -
Tsu08g01735 607 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu08g01735 607 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01735 607 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Tsu08g01735 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01735 Tsu-Chr8 21039213 21044771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01735 3 605 MAP Kinase Gene Family AT1G53510 65.600 0.0 774
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu08g01735 Pkinase 8.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01735 - K04371 gmx:100800878 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01735 08 21039213 21044771 Tsu08g01735 08 21039213 21044771 ECH