Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01730 ATGAAGGAAATCGACAAGGAGATTTACGATTTAGTTGAGGGTATCATTAAAAAACGAGAAACAGAAATGAAGaatggaaaagaaaataatgatgATTTATTAGGCATACTTATGGAATCAAATAACCTTGAAATTCAAGGACATGAAAAAAGTAAGACAGTTGGAATGTCTTATGATGAACTAGTTAAGGAGTGCAAACAATTCTACATTGCAGGACAAGAGACTACTTCATCTTTATTAGTTTGGACAATGGTATTATTGGCTAGGTATCCTGAATGGCAAGAACGTGCAAGGCAAGAAATTTTGCAAGTTTTTGGAAACCAAACTCCAAATCATAATGGGTTAAATCAACTTAAAATTGTGACCATGATTTTATACGAGGTTCTCAGATTATATCCACCAACAGTTTACTTAGTTCGAgctattcaaaaaaatttaaaacttcaAAACCTATCATTACCGGCAGGAATAAATATTTCCATACCAATACTTTTGGTTCACCATGATTCTGATATATGGGGTGATGATGCAAAAGAGTTTAAACCTGAAAGGTTCTCTGAAGGAATTGCAAAGGTCACAAAAGGTcaagtttcattttttccatttggATGGGGTCCTAGGATATGCATTGGTCAAAACTTTGCCTTATTGGAAGCCAAAGTAGTATTGTCATTACTTCTACAAAATTTCTCATTTGAGCTTTCTGCAGATTATAAGCATGCTCCTACTGCTATTCTTTCTCTGCAACCAAAGCATGGGGCTTTGATCCGTCTCCATAAAGTGTAA 786 0.3244 MKEIDKEIYDLVEGIIKKRETEMKNGKENNDDLLGILMESNNLEIQGHEKSKTVGMSYDELVKECKQFYIAGQETTSSLLVWTMVLLARYPEWQERARQEILQVFGNQTPNHNGLNQLKIVTMILYEVLRLYPPTVYLVRAIQKNLKLQNLSLPAGINISIPILLVHHDSDIWGDDAKEFKPERFSEGIAKVTKGQVSFFPFGWGPRICIGQNFALLEAKVVLSLLLQNFSFELSADYKHAPTAILSLQPKHGALIRLHKV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01730 261 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 252 - -
Tsu08g01730 261 PRINTS P450 superfamily signature 209 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 PRINTS P450 superfamily signature 71 88 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 PRINTS P450 superfamily signature 200 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 PRINTS P450 superfamily signature 123 134 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 SUPERFAMILY Cytochrome P450 2 259 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 PANTHER CYTOCHROME P450 72A11-RELATED 1 252 - -
Tsu08g01730 261 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 202 211 IPR017972 GO:0005506|GO:0016705
Tsu08g01730 261 Pfam Cytochrome P450 2 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 Gene3D Cytochrome P450 1 261 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 PRINTS E-class P450 group I signature 80 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 PRINTS E-class P450 group I signature 60 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 PRINTS E-class P450 group I signature 209 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 PRINTS E-class P450 group I signature 163 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01730 261 PRINTS E-class P450 group I signature 199 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01730 Tsu-Chr8 20945226 20947047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01730 1 261 Cytochrome P450 AT3G14680 59.770 2.38e-114 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01730 - K17873 gmx:100790445 399.438