Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01716 ATGAACATATTCCGCAAGCTTGCCCGAGCTGTTGGAGCGGGGAATCATCGGCGGAATAATACTTTCCGCCGATCTGACTCATCAAAAGAGCCGCTAGCTGAGACTTCAGAGAACAGTCACGTGCCTGAAGGTCATGTGCCAGTGTACGTGGGAGAGGAGATGGTCAGGTTTGTTGTGAATGCTGAGCTGCTGAATCATCCTGTTTTCGTGAAACTGCTGAACATGTCTGCTCAAGAGTATGGTTATCAAGGTGTGCTTCGAATCCCTTGCCGTGTCGTGGTGTTTGAGCGAATTCTTGAAGCGATTCGACTCGGTCGTAGCGTGAGTGTAATTCATGAACTCCTCTCTGATGAGTGA 357 0.493 MNIFRKLARAVGAGNHRRNNTFRRSDSSKEPLAETSENSHVPEGHVPVYVGEEMVRFVVNAELLNHPVFVKLLNMSAQEYGYQGVLRIPCRVVVFERILEAIRLGRSVSVIHELLSDE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01716 118 Pfam Auxin responsive protein 23 101 IPR003676 GO:0009733
Tsu08g01716 118 MobiDBLite consensus disorder prediction 15 44 - -
Tsu08g01716 118 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 17 113 - -
Tsu08g01716 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 113 IPR003676 GO:0009733
Tsu08g01716 118 MobiDBLite consensus disorder prediction 19 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01716 Tsu-Chr8 20769032 20769388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01716 16 102 Calmodulin-binding Proteins AT3G43120 35.556 4.84e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01716 K14488 - jre:109001765 122.864