Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01680 ATGGTGCCAATAGAGATCAACAAGACTAATGACAACTTTTATGATTTCTCCCAAGGCTTTTACCACAAGTTTGGTGAGGATACCAATATGTACATTGACAACGTCTGGAGTTTGCAAACAAGCAGCGACGGAGGATCAGTTGCAATGGCAATTGATAACAGCAGTGTTGGGTCCAACGATTCTCATATGTGCTTGTTGGATCACCAAGGGTTGAAGAGGCATGCCAATGATAACTATTCGGTTGCACACAATGCCAATCATCGGGGAAGAGTCACACATGCATTGAGTAACGATGCTTTAGCTCAAGCTCTGATGGACAATAATTCTCCGATTAAAGAGTGGAAAATTGATTTAAGGAAGTTATATATGGGCGAGTCTTTTGCTCAAGGAGCTCTCGGGAAACTCTACAGAGGCACTTACGATAGGGGAAATGTCGCTATCAAATTCTTAGAGAGGCATGAGAATAACGTATTATCGATTAAAGAGGAGAAAATTGATTTGAGGAGGTTAAATATGGGTGAGGCTTTTGCTCAAAGAGCTTTCAGGAAACTCTACAGAGGTACTTACGATGGGGAAGATGTTGCTATCAAACTCTTGGAGAGGTCTAAGAATAACATAATTAATGGCTCAGTTGATGGAACAACAATTTCAACGGGAGGTCATGATGCTGGCTACACCGAACCATCCCAAAATAGTTCGTTTCATAGGTGCATGGTGTAA 720 0.4153 MVPIEINKTNDNFYDFSQGFYHKFGEDTNMYIDNVWSLQTSSDGGSVAMAIDNSSVGSNDSHMCLLDHQGLKRHANDNYSVAHNANHRGRVTHALSNDALAQALMDNNSPIKEWKIDLRKLYMGESFAQGALGKLYRGTYDRGNVAIKFLERHENNVLSIKEEKIDLRRLNMGEAFAQRAFRKLYRGTYDGEDVAIKLLERSKNNIINGSVDGTTISTGGHDAGYTEPSQNSSFHRCMV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01680 239 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 4 157 - -
Tsu08g01680 239 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 161 206 - -
Tsu08g01680 239 Coils Coil 150 170 - -
Tsu08g01680 239 Gene3D Phosphorylase Kinase; domain 1 162 208 - -
Tsu08g01680 239 MobiDBLite consensus disorder prediction 218 239 - -
Tsu08g01680 239 Gene3D Phosphorylase Kinase; domain 1 110 161 - -
Tsu08g01680 239 PANTHER SERINE-THREONINE PROTEIN KINASE 161 206 - -
Tsu08g01680 239 PANTHER SERINE-THREONINE PROTEIN KINASE 4 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01680 Tsu-Chr8 20101140 20101859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01680 7 156 MAP Kinase Kinase Kinase AT4G31170 54.938 4.74e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01680 - - gmx:100802077 234.958