Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01676 ATGTGGGGTTACTCAACTAACTTGATGTTATATGATGATCCTTGGAAGATCAAGaaagtgttggaacaaagtgACATTGATCGTTCAAGTAGACTGATGCTAGATAAAAAATTGGTTGAAGATTTGGTATTGCCTGTATTGAATGCTAAAGATGATGATCTTGTGAAAGGAACTGAAGTGAAGATATGGGATATTGAGACTAACTCAATGCACATTCTCAAACTCAAGAGATGGTCTTCTTCAGGAAGCTATGTTTTCATCAATGGATGGGTTAGAGATTTTGTAACTAGAAAGGGTTTACAAAAAGGGGATGAGATTGGTCTTCATTGGGACCAATACAACCAACGCTTTGATTTCTCTGTTCTTCGAGCCTTTAagaattga 384 0.3438 MWGYSTNLMLYDDPWKIKKVLEQSDIDRSSRLMLDKKLVEDLVLPVLNAKDDDLVKGTEVKIWDIETNSMHILKLKRWSSSGSYVFINGWVRDFVTRKGLQKGDEIGLHWDQYNQRFDFSVLRAFKN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01676 127 SUPERFAMILY DNA-binding pseudobarrel domain 13 122 IPR015300 -
Tsu08g01676 127 Gene3D - 14 123 IPR015300 -
Tsu08g01676 127 CDD B3_DNA 15 123 IPR003340 GO:0003677
Tsu08g01676 127 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 123 - -
Tsu08g01676 127 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01676 Tsu-Chr8 20024751 20025134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01676 17 111 B3 DNA Binding Superfamily AT3G24650 33.684 5.40e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01676 - - lang:109331497 165.236