Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01657 ATGGTATACAGTGGAGCCGTTGATAGAATTATCGGTAGGCCGCCTCCTAAGACTGGCGATATTGTTTTGGTATCAGATGGGACTGAGAAACCAATAGGGTGGGGCTTGTACAACTCAGTTTCTATGTTCTGTGTTCGGCTCATGCAGCTTGAAGACGAAGCAACCAGTGATTCAGCATGTGCATTGAACATGAAGAAACTTCTTGAAACTAGAATTGATGCTGCTGTTGAATTGCGTAGAAGGTTGGGACTTCCTTCTGTCCATACGAATGCGTATCGTCTAATCAATAGTGAGGGTGACAGATTATCAGGATTGATAGTTGATGTATTTGGAGATGTAGCTGTAGTAGCATCATCTGCTGCTTGGGTTGAGAAGTACAAATCAGAGATAGAGGCATGTATCAGGAAAATCAATTATATCAATCATATAAATTGGAGACCGtctattgatattttaaaggaAGATGGAGTTAATGTGTCTGATTCAAAGGAAATGCTTTCATCTACTTGTCCTGAAAGAACAAAGATTATGGAAAATGGAATTGTGTACACAATTTCACTGAAAGGACAAAAGACAGGATTCTATGCAGATCAACGTGAGAATCGTCAGTTCATATCAAGAATTTCAGATGGCCAAAAGGTTCTTGATCTTTGTTGCTATAGTGGTGGTTTTTCTCTAAATGCAGTGCGTGGAGGTGCTCTAAATGTCACTGGTGTTGACTCATCGCTGCCAGCTCTGGAGCTTGCTAAAGAAAATGTTGTACTTAACAACATTGATCCTGGAAGAATATCCTTTTTGAAAGAAGATGCAACTGAATTCATGAAGGGTGCTCTTCTGAGAAATGAATCTTGGGATATTGTCGTCATTGATCCTCCTAAACTGGCACCTTCAAAAAAGGTTCTACATGGTGCGTCTGGTATGTACAGAAATTTGAATTCGTTGGCCATGCAACTTACAAAAAGAGGCGGTCTTCTAATGACCTGTTCCTGTTCTGGAGCTGTGACCCAAAGTGGAATTTTCCCGCGGATCCTGCAGAGTGCAGCTTCTATGGCAAAGAGAAAAATCACCGTTCTAAGAGATGCTGGAGCTGCCTGTGACCATCCTATTGATCCATCGTACCCAGAAGGCGCATACCTAACCAACATTCTATTGAGAGTTTCATGA 1164 0.4098 MVYSGAVDRIIGRPPPKTGDIVLVSDGTEKPIGWGLYNSVSMFCVRLMQLEDEATSDSACALNMKKLLETRIDAAVELRRRLGLPSVHTNAYRLINSEGDRLSGLIVDVFGDVAVVASSAAWVEKYKSEIEACIRKINYINHINWRPSIDILKEDGVNVSDSKEMLSSTCPERTKIMENGIVYTISLKGQKTGFYADQRENRQFISRISDGQKVLDLCCYSGGFSLNAVRGGALNVTGVDSSLPALELAKENVVLNNIDPGRISFLKEDATEFMKGALLRNESWDIVVIDPPKLAPSKKVLHGASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQSGIFPRILQSAASMAKRKITVLRDAGAACDHPIDPSYPEGAYLTNILLRVS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01657 387 Pfam S-adenosylmethionine-dependent methyltransferase 162 350 IPR019614 GO:0008168
Tsu08g01657 387 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 1 386 - -
Tsu08g01657 387 Gene3D PUA domain 1 53 IPR036974 GO:0003723
Tsu08g01657 387 Gene3D Vaccinia Virus protein VP39 174 387 IPR029063 -
Tsu08g01657 387 CDD RlmI_M_like 67 156 - -
Tsu08g01657 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 382 IPR029063 -
Tsu08g01657 387 CDD AdoMet_MTases 213 328 - -
Tsu08g01657 387 Gene3D RNA methyltransferase domain (HRMD) like 64 172 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01657 - - gmx:100796633 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01657 08 19791077 19797871 Tsu08g01657 08 19791077 19797871 ECH