Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01656 ATGGCAACAAACACCGCTGGATCCAATGATCCTACTCTTAATAGAAGACAAACTAAACGACCCAAGTACTCGAAGTTTACTCAACAAGAACTTCCGGCATGCAAGCCTATTCTAACACCACAAGcgGTTATTTCAGCATTCTTGATTGTCACCGTCGTATTTATCCCTATTGGAGTTGCTTCGCTTATTGCTTCACGAGATGTTGTTGAAATTGTTGATAGGTATGAGGCAGAGTGTGTACCGTCAAATTGGACAGACAAAGTAGCATACATTCAGAGTGGTGCCGATAAAACTTGTAAAAGGGAGCTGCATGTTGAGAAGCGAATGAAGGCTCCTATCTATGTTTACTATCAGCTTGACAACTTCTACCAGAATCATCGTCGgtatgTGAAAAGCCGAAATGATGAGCAATTGAGGGATGCTGGAAAAGGAAACTCAACAAGTGGTTGTGACCCTGAAACTAATATAAATGGAGTGCCAATCGTACCTTGTGGTCTTATAGCTTGGAGCATGTTCAATGATACATACAGCTTCTCGCGCAACAAAAATAATGTGACAGTGAACAAGAAAGGAATCTCATGGAAGAGTGATAGGGATCACAAATTTGGAAGTGATGTTTTCCCTAAAAATTTCCAGAATGGTGCCATTAAAGGTGGTGCTAGTCTCAATGAAACAATACCGGTAAATCTTTTACATAGAATTAGGCCGAATATGGATTAG 720 0.4 MATNTAGSNDPTLNRRQTKRPKYSKFTQQELPACKPILTPQAVISAFLIVTVVFIPIGVASLIASRDVVEIVDRYEAECVPSNWTDKVAYIQSGADKTCKRELHVEKRMKAPIYVYYQLDNFYQNHRRYVKSRNDEQLRDAGKGNSTSGCDPETNINGVPIVPCGLIAWSMFNDTYSFSRNKNNVTVNKKGISWKSDRDHKFGSDVFPKNFQNGAIKGGASLNETIPVNLLHRIRPNMD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01656 239 MobiDBLite consensus disorder prediction 1 24 - -
Tsu08g01656 239 MobiDBLite consensus disorder prediction 133 152 - -
Tsu08g01656 239 PANTHER CELL CYCLE CONTROL PROTEIN 50 6 228 IPR005045 GO:0016020
Tsu08g01656 239 PIRSF Lem3/Cdc50 2 232 IPR005045 GO:0016020
Tsu08g01656 239 PANTHER ALA-INTERACTING SUBUNIT 6 228 - -
Tsu08g01656 239 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 62 211 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01656 Tsu-Chr8 19786183 19790673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01656 - - gmx:100791515 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01656 08 19786183 19790673 Tsu08g01656 08 19786183 19790673 ECH
Tsu02g03754 02 42523432 42527738 Tsu08g01656 08 19786183 19790673 PCT