Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01653 ATGCAATTCAATGAGGCTCGCCGCAACGCTAATGTGAATGAACTCAATGATCAACTGACGCAAATCAACAACACGCTAGACGACGTGAAGAAGCATGGTGATGAGCTGAGGCATTTGCACAAGGAGATCAAGGCTTTATTTTGGTGGGCTTGTCCAATTGGTGGGATGAATAGGGTTGAACTTGAATTTCTAAAGAAGGCTTCGAAGGAGCTTAAGAATCTTGTTGCACAACATGTTATTGGAATTGCAATTCAGGACGTGCCTAGTCAAACTCTCCCATTTTTTGCTGGCAATGCTTCATCCTCTGACATCCCTCTCTATATGTCAAATCCTCGACAGGCTCAAATATTTCCACCACAACTTCCTCAAAATCATATGTTGCAATCTAATTTGTTTGGCTACAACAATATAAGATGA 417 0.4149 MQFNEARRNANVNELNDQLTQINNTLDDVKKHGDELRHLHKEIKALFWWACPIGGMNRVELEFLKKASKELKNLVAQHVIGIAIQDVPSQTLPFFAGNASSSDIPLYMSNPRQAQIFPPQLPQNHMLQSNLFGYNNIR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01653 138 Gene3D - 1 87 - -
Tsu08g01653 138 Coils Coil 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01653 Tsu-Chr8 19665218 19665634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01653 1 135 Type I MADS-box Gene Family AT5G60440 30.882 8.63e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01653 - K16599 mtr:MTR_7g062350 133.265