Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01652 ATGCAATTCATTGAGGCTCGCCGCAATACTAACATGATTGAGCTCAATGCTCAACTGACTCAAATCAACAACACATTGGACGACATGAAGAAGCATGGTGATGAGCTGAGCCAATTACACCAGGAGACGAAGGCATTATTTTGGTGGGGTTGTCCAATTGGTGGGATGAATAGAGTTGAACTTGAATCCCTGAAGAATGCTTTGAAGGAGCTTAAGAATCTTGTTGCACAACATGTTAATGGGATTGCAATTCAGGACGCACCTACTCAAACTCTTCCATTTTTTGTTGGCAATGCTTCATCATCTAGCATCCATCTCTATATGTCAAATCCTCAACTTGCTCAAATGATTCCACCACAACTTCCTCAAAATCCTATGTTGTAA 384 0.4115 MQFIEARRNTNMIELNAQLTQINNTLDDMKKHGDELSQLHQETKALFWWGCPIGGMNRVELESLKNALKELKNLVAQHVNGIAIQDAPTQTLPFFVGNASSSSIHLYMSNPQLAQMIPPQLPQNPML 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01652 127 Coils Coil 61 81 - -
Tsu08g01652 127 Gene3D - 1 91 - -
Tsu08g01652 127 Coils Coil 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01652 Tsu-Chr8 19656883 19657266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01652 1 103 Type I MADS-box Gene Family AT5G60440 34.615 8.60e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01652 - K05466 mtr:MTR_7g062350 127.872