Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01636 ATGGTCATTGTTCTCATATTCACATTTGCTATCAAACAAAACGGTGTACGAGGATGGGCTGATTTTGTAAAAACAGGTGTGCGCATTTACAATGGTTTAGGGGGTGATGATTTTAATGTTCATTGCAAATCTAAAGATGATAATTTAGGATATCACGTGATTCACAACAATGAATTTTATGAGTGGAGATTTCACCCTAATTTTTGGCGTACAACGTTATTCTTTTGTCATATATCATGGGCAGGAGGTGAACTAACAGATGATTTCTACAAACAAAAAAGGGATGCACATATTAAAAGGTGTAGATTTTATTGTGACTGGAATGTTACCAAAGATGGCGTACAAGGTTACAAAGAAGTGCTTAATTCTCGTGGAGATTGGGTTGGTCGGAAGCcagacttattttttaattggacAATAGGGAACTGA 429 0.3473 MVIVLIFTFAIKQNGVRGWADFVKTGVRIYNGLGGDDFNVHCKSKDDNLGYHVIHNNEFYEWRFHPNFWRTTLFFCHISWAGGELTDDFYKQKRDAHIKRCRFYCDWNVTKDGVQGYKEVLNSRGDWVGRKPDLFFNWTIGN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01636 142 Pfam Plant self-incompatibility protein S1 27 116 IPR010264 -
Tsu08g01636 142 PANTHER - 21 116 IPR010264 -
Tsu08g01636 142 PANTHER - 21 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01636 Tsu-Chr8 19528655 19529179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01636 21 113 Carbohydrate Esterase AT3G16970 40.625 2.16e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01636 - - cic:CICLE_v10006952mg 122.864