Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01583 atggattTGATACGAAGTCCCACACTACTTTCCTACCTATATTTcacattttctctatttctctttgtcaaatttctAATCccaatcaaaaaaataaatcaaaaaaattactcCAAACTTCCACCAGGTCCTTCACCACTTCCCATAATAGGAAACCTTCTAAAACTAGGTAACAAACCACATCATTCCTTAGCTAACCTTTCCAACATTCATGGCCCAATAATGACACTAAAATTTGGCCAAATAACAACCATAGTAGTTTCTTCATCAGACATAGCAAAAGAAATTCTCCAAACACATGACAACTTACTCTCAAACCGAACAGTCCCGGACGCACTATCCGCTCTCAACCACGACCAATATAGTTTATCTTTTATGCGCGTTTCGCCTCGTTGGCGTGACCTTAgaaaaatttgcaataaccAATTGTTTTCGAGTAAAAGTCTCGATTCGAGTCAAGCACTTAGGCGCAGGAAATTACAAGATCTTCTTGATGACATTGAAAAGTGCAGTGAAAATGCGGAAGCTGTGGATATTGGAAGAGTTGCTTTTAAGACGACGGTTAATTTGTTGTCGAATACTTTTTTCTCGGCAAATTTTGTGAATTCGGCCGAGGAGGCTGGAGAGTATAAGAAGATTGTTGTGAGTATATTGAAGGAAGTTGGAACACCAAATTTGTCGGATTTTTTCCCTATGTTGAAGGTTTTTGATTTGCAGGGTATTAGAAGGCGTTCAGTTGTTTCTGTTAATAAGGTTTTGAGTATTTTTAGGAGATTCATTGGGGAAAGGTTGAAGATGAGGGAAGGTACTTGTTCTATTGGAAATGATGATATGCTTGATGCTTTGCTTAATATTTCTTTGGATAATGGGAAGATTGAGATGGATAAAGATGAGATTGAACATTTGTTGCTGAACTTATTTGTTGCAGGAACAGAACCAACAACATACACACTAGAATGGGCAATGGCAGAGTTAATGAACAATTCAGAAATCATGTCAAAAGTACAAAAAGAACTCGAGCAAGCTGTTGGCAAAGGTATTCCAATACAAGAAACTGACATAGCCAAACTACCTTACATGCAAGCAGTTATAAAAGAGACATTTCGTTTACATCCAGCCGTTCCGTTTTTACTTCCTCGTAAAGCCGAAGCAGATGTCAAAATTGGTGAATACACTATTCCAAAAGATGCACAAATTTTGGTTAATGCTTGGGTTATTGGTAGAGACCCAAATAAATGGGATAATCCTAATGTTTTTCTACCAGAGAGGTTTTTGGATTGTGAAATTGATGTTAAAGGACATCATTTTGAGCTTATTCCATTTGGGTCTGGTAGAAGAATTTGTCCTGGTTTGCCTTTAGCTTTTAGAATGTTGCCTTTGATGTTGGGATCTTTGATTAATTGCTTTAGCTGGAAACTTGAAGATGGATTGAATGTTGATGATTTGAATAAGGAAGATGAATATGGGATAACTTTGGAAAAATCTCAACCTGTGAGGATTGTTCCAATCAAATTAACCGAAAAGGATTATATGTTGTAA 1539 0.3522 MDLIRSPTLLSYLYFTFSLFLFVKFLIPIKKINQKNYSKLPPGPSPLPIIGNLLKLGNKPHHSLANLSNIHGPIMTLKFGQITTIVVSSSDIAKEILQTHDNLLSNRTVPDALSALNHDQYSLSFMRVSPRWRDLRKICNNQLFSSKSLDSSQALRRRKLQDLLDDIEKCSENAEAVDIGRVAFKTTVNLLSNTFFSANFVNSAEEAGEYKKIVVSILKEVGTPNLSDFFPMLKVFDLQGIRRRSVVSVNKVLSIFRRFIGERLKMREGTCSIGNDDMLDALLNISLDNGKIEMDKDEIEHLLLNLFVAGTEPTTYTLEWAMAELMNNSEIMSKVQKELEQAVGKGIPIQETDIAKLPYMQAVIKETFRLHPAVPFLLPRKAEADVKIGEYTIPKDAQILVNAWVIGRDPNKWDNPNVFLPERFLDCEIDVKGHHFELIPFGSGRRICPGLPLAFRMLPLMLGSLINCFSWKLEDGLNVDDLNKEDEYGITLEKSQPVRIVPIKLTEKDYML 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01583 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Tsu08g01583 512 Gene3D Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 506 - -
Tsu08g01583 512 Pfam Cytochrome P450 41 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 506 - -
Tsu08g01583 512 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01583 512 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01583 Tsu-Chr8 18748887 18751253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01583 1 504 Cytochrome P450 AT2G45550 42.218 9.55e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01583 - K23810 gmx:100805772 572.392