Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01559 ATGAAGGAGATATGCAATTCAATGGAAGGACTAAAACCAGTCATACTAATGTTGATTTCACAGATTGCATTAGCTGCTGCAAATGTCATAGCTAAGCTTGCCATAGATGATGGTATGAGCATGAGGGTGGCTACCGCTTACCGTCTCATTTTTTCGTCGGCTTTCACCATTCCGCTTGCTCTTATTTTTGATAGCAGAAAAAAAAGACCAAAGATTACTTGGAAGGTGTTATATTTGGGATTTTTATCTGGATTGTTTGGGGGAAGTTTATATGTGAACCTTTATAGTGAGGGCATTGTTTTGACCTCAACAACGTTTATGTTAGCTATGTTCAACGTTACTCCAGGCATTACCTTCATCATGGCAATATTATTTAGATTGGAAAAACTAAATTGGAGTGCGGTAGAAGGAAAGGCTAAACTGATAGGAACAATAATAGGAATTGGTGGGGCGATGATCATGACATTTTACAATGGAGCAAAAATCCCATCATCCAATATCAACCTTTTGCATACACATCACAATCAAAATGGGCATATGGAGCCACAACATAAGGACTTTAGTAATAAACTAGTGGGAGTTATATGTGCCATAGGAAGTAGCTGCTCTTTTTCTCTATGGTTTATTGTTCAGGCTAAAATGAATAAAGAATATCCAAGTCAATATTCAAGCTCAGCTTTGATGTCTACAATGGGAGCAATACAAGCCATTGTTTTTGCTCTTTGTGTTGACAGAGATTGGACTCAATGGAAGCTTGGTTACAATATCAGGCTTCTCATGGTAGCTTATACGGGAATTGTATCCTCAGGAATAACTATCGTTATTGTTGCTTGGTGCATAAAGATGAGAGGCCCTCTCTTTGCGTCTGTTTTCTACCCTCttcaacttttatttatagCTATCGCTGCTTATTTGATGTTGGATGAGAAGTTATATTTAGGAAGGTATATTGATTATATATCATTATCCTTTCAAACTTTTTCGACATATCATATGCTTGAATTCGAAACATGA 1014 0.3669 MKEICNSMEGLKPVILMLISQIALAAANVIAKLAIDDGMSMRVATAYRLIFSSAFTIPLALIFDSRKKRPKITWKVLYLGFLSGLFGGSLYVNLYSEGIVLTSTTFMLAMFNVTPGITFIMAILFRLEKLNWSAVEGKAKLIGTIIGIGGAMIMTFYNGAKIPSSNINLLHTHHNQNGHMEPQHKDFSNKLVGVICAIGSSCSFSLWFIVQAKMNKEYPSQYSSSALMSTMGAIQAIVFALCVDRDWTQWKLGYNIRLLMVAYTGIVSSGITIVIVAWCIKMRGPLFASVFYPLQLLFIAIAAYLMLDEKLYLGRYIDYISLSFQTFSTYHMLEFET 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01559 337 PANTHER WAT1-RELATED PROTEIN 9 316 IPR030184 GO:0016021|GO:0022857
Tsu08g01559 337 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 9 316 - -
Tsu08g01559 337 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 316 - -
Tsu08g01559 337 Pfam EamA-like transporter family 12 155 IPR000620 GO:0016020|GO:0016021
Tsu08g01559 337 Pfam EamA-like transporter family 192 316 IPR000620 GO:0016020|GO:0016021
Tsu08g01559 337 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01559 Tsu-Chr8 18281867 18358039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01559 11 317 Nodulin-like Gene Family AT1G25270 41.100 4.13e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01559 - - cam:101515687 419.083