Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01553 ATGTTGGAGTTACCATTCAATATGACACTTAGCATCCCTACATTATATTTCAAGTCCTTACCTTTTGCTCAGAACTTGGAGCCTGAATTTCTGAATGGTGCAATTGCTCTTGTTGCTGTTGGCCTAACTGCTGCTTATATTTACTATCGCAAGAACCCCAAAGGTTGCTTGGACCCCAAAAATTTCAAAGAATTTAAACTTGTAAAGAAGACCCAGATCAGCCCAAATGCTGCAAGATTCAAATTTGCCCTTCCTACTCCTAAATCAATATTGGGTCTTCCTGTTGGAAAAAACATACTTGTCAGAGGAAGAGATAGTCAAGGAGAGGAAGTTATGAGATCATATACTCCAATCACATTGGATTCAGATATTGGCTATTTTGAATTAGTTGTGAAgATGTATCCAAATGGAAAAATGTCCCACCATTTTAGACAAATGAAGGAAGGTGACAACTTGGCAGTGAAGGGTCCCAAGGGACGATTCAGCTACAAACCTGGCCAAGTTAGGGCATTTGGAATGATTGCTGGAGGTTCAGGCATCACCCCAATGTTTCAGATAATAAGAGCTATATTAGAAAACCCAAAGGACAAAACAAAGGTGTACCTCATTTACGCCAATGTAACAGTGGATGATATCCTACTAAAGGAAGAACTAGATCGCTTTGCGAACACATTTCCTCACAGATTCCATGTCTATCATGTTCTTAATAAGGTTTTAAAACTTATTGTCTCATTTGTATGA 741 0.386 MLELPFNMTLSIPTLYFKSLPFAQNLEPEFLNGAIALVAVGLTAAYIYYRKNPKGCLDPKNFKEFKLVKKTQISPNAARFKFALPTPKSILGLPVGKNILVRGRDSQGEEVMRSYTPITLDSDIGYFELVVKMYPNGKMSHHFRQMKEGDNLAVKGPKGRFSYKPGQVRAFGMIAGGSGITPMFQIIRAILENPKDKTKVYLIYANVTVDDILLKEELDRFANTFPHRFHVYHVLNKVLKLIVSFV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01553 246 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 60 164 IPR017927 GO:0016491
Tsu08g01553 246 Pfam Oxidoreductase FAD-binding domain 65 163 IPR008333 -
Tsu08g01553 246 CDD cyt_b5_reduct_like 65 237 - -
Tsu08g01553 246 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 210 221 IPR001709 GO:0016491
Tsu08g01553 246 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 172 191 IPR001709 GO:0016491
Tsu08g01553 246 PRINTS Cytochrome B5 reductase signature 113 120 - -
Tsu08g01553 246 PRINTS Cytochrome B5 reductase signature 210 221 - -
Tsu08g01553 246 PRINTS Cytochrome B5 reductase signature 91 102 - -
Tsu08g01553 246 PRINTS Cytochrome B5 reductase signature 172 191 - -
Tsu08g01553 246 PRINTS Cytochrome B5 reductase signature 149 163 - -
Tsu08g01553 246 Pfam Oxidoreductase NAD-binding domain 173 235 IPR001433 GO:0016491
Tsu08g01553 246 Gene3D Translation factors 55 156 - -
Tsu08g01553 246 Gene3D - 157 240 IPR039261 -
Tsu08g01553 246 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 237 IPR001834 GO:0016491
Tsu08g01553 246 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 152 237 IPR039261 -
Tsu08g01553 246 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 237 - -
Tsu08g01553 246 SUPERFAMILY Riboflavin synthase domain-like 54 165 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01553 Tsu-Chr8 18198132 18200505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01553 46 237 NADPH P450 reductases AT5G17770 66.146 1.32e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01553 K00326 - gmx:100809584 408.683