Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01537 ATGGCAGAAGTTATCACCAACATTCCCTCCGATTCCCTCGACAAATCCCCAACCTCCTCCTCCGCCcctcctcctccaccaccaccacctccgtCCTCTTCCGGCGCTGATTCCGATCTCCCTCCACCTTCTCATCCACCTCAACATTCCTCCTATCGCCGTAGGGATTACCGTAGAGATGATAGAGATTTCGATCGTCCTCCTAATCGCCGCGAATATTATGACCGTAACATGTCGCCGCCGCCAAGGGATAGAGATAGAGACTTCAAACGTAGGCGTAGTCCCAGTCCTCCGTATCGTGACCGCCGATATTCTCCTCCTCCACGGCGATCGCCTCCACATTACAATTACAAGCGCTCCAGGAGAGGAGGCAGTCCACGTGGCGGTTATGGACCAGATGATAGCAGATCTGGATATGATCATTACGGTGGTTATGATAGGGGTGGAAGAGGTGGTTATGATAGGGGTGGAAGAGGTGGTAATGATAGGGGTGGAAGAGGTGGTTATGCTGATGACAGGTCTTATGGTAGGTTTGGAAATCGTTCTGCAGCAGGATATCAAAATGGGATCTCTGATATGGAATACAATCGTGGTTATGCAGACTTGCCAAGTGGTGGTGCACAAAGAGAAGGGTTGATGTCCTATAAACAATTCATTCAGGAGCTTGAGGATGATATACTACCAACTGAAGCAGAACGTAGGTATCAAGAATACAGAACAGAGTACATTTCTACCCAAAAGAGAGCTTATTTCAATGCTCATAAGGATGAGGAGTGGTTGAAGGATAAATATCATCCAACAAATTTGCTTACTGTCATTGACAGGAGGAATGAAAGTGCTCGACAGCTGGCAAAGGATTTTTTGCTTGATTTGCAGAGTGGAACATTAGATATAAATCCGGGTTTAAGTGCCTCTTCATCCAGCAAATCAGGGCAAGCTAGCGAGCCAAATTCAGAGGAGGAAGCGGATGGCAAACGAAGAAGACATGGAAGGGGTTCTAATAAACAAAGTGATTTCTCAGCTGCTCCAAAGACTCATCCTATCAGTTCTGAACCTAAAAGAATACAAGCCGATGTTCAACAGGCTCAGTCCCTTGTTCACAAGCTTGACACTGAAAAGGGGATTAGAGATAATATTTTATGCAGCAGTGATCACAGTAAAGCTGATGATAAGTCTCATAGTGGTTCTGCGGGCCCCACAGTCATTATACGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGTTGAGCTTTTGGACACACTTATTACATATTTGTGGCGGATTCATGGTGTAGATTACTATGGCATGATTGAGACTAATGATGCAAAGGGTTTTAGGCATGTGAGGCCAGAAAGAATAGGGCATGCAGAAACAGGTAAATCAGGGTCTGAATGGGAGAAGAAACTTGACTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCATTGGAAGTAATGGCTGCTAAGGAGAAAATAGAAGCTGCAGCAGTTGAAGTGTTGGATCCATATGTTAGAAAAATCAGGGATGAAAAATATGGATGGAAGTATGGTTGTGGAGCTAAAGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGTATAAACATCTGAAACTAAAACACCCAGAGCTTGCTCTTGAACAAACTTCAAAATTGCGTGAGGATCTCTATACTCAAAATTACATGGATGATCCAGATGCTCCTGGTGGAAAGCCTGTCATGCAGCAACCTCAGAGGGATAACAAGCCTTTAAATCGAAGGTTAGGTATGGAGGGCCGATTGAGAGATGATCGTGGTAATCGTCAAGACCATGAACGGAATGACAGAATAAATGACATGGATAGACCTGATTCCCCATCCCGTGAAAGGCAGTCTAAAGCACTTGAGATGGGAAACCATGATGAAACAATGTATGACGCTTATGCAGGTCCTGGAGTTCCTCCTTTTTCCTCGGATATGCCTCCGCCAGTATTGATGCCTGTACCTGGTGCTGGGCCATTAGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCCATGCAAATGTTAAGAGAACAAGGAGGGCCATCTTCATATGATGCTTCTGGAAGAAATATGCTGTCTGGCCCTCATATAGGTGGACCGACACCAATAATTGCTGTTCCTCCAGCTTTTAGACCAGATCCTCGGAAGATGCGAAGTTATCAAGATTTGGATGCTCCAGACGACGAGGTCACCGTGATAGACTATCGAAGTTTGTAG 2238 0.4468 MAEVITNIPSDSLDKSPTSSSAPPPPPPPPPSSSGADSDLPPPSHPPQHSSYRRRDYRRDDRDFDRPPNRREYYDRNMSPPPRDRDRDFKRRRSPSPPYRDRRYSPPPRRSPPHYNYKRSRRGGSPRGGYGPDDSRSGYDHYGGYDRGGRGGYDRGGRGGNDRGGRGGYADDRSYGRFGNRSAAGYQNGISDMEYNRGYADLPSGGAQREGLMSYKQFIQELEDDILPTEAERRYQEYRTEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIDRRNESARQLAKDFLLDLQSGTLDINPGLSASSSSKSGQASEPNSEEEADGKRRRHGRGSNKQSDFSAAPKTHPISSEPKRIQADVQQAQSLVHKLDTEKGIRDNILCSSDHSKADDKSHSGSAGPTVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNDAKGFRHVRPERIGHAETGKSGSEWEKKLDSFWQGRLNGQDPLEVMAAKEKIEAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELALEQTSKLREDLYTQNYMDDPDAPGGKPVMQQPQRDNKPLNRRLGMEGRLRDDRGNRQDHERNDRINDMDRPDSPSRERQSKALEMGNHDETMYDAYAGPGVPPFSSDMPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYDASGRNMLSGPHIGGPTPIIAVPPAFRPDPRKMRSYQDLDAPDDEVTVIDYRSL 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01537 745 ProSitePatterns Zinc finger C2H2 type domain signature. 518 541 IPR013087 -
Tsu08g01537 745 MobiDBLite consensus disorder prediction 686 731 - -
Tsu08g01537 745 MobiDBLite consensus disorder prediction 584 625 - -
Tsu08g01537 745 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 745 - -
Tsu08g01537 745 Pfam SERRATE/Ars2, N-terminal domain 216 297 IPR021933 -
Tsu08g01537 745 MobiDBLite consensus disorder prediction 560 625 - -
Tsu08g01537 745 MobiDBLite consensus disorder prediction 49 108 - -
Tsu08g01537 745 MobiDBLite consensus disorder prediction 139 170 - -
Tsu08g01537 745 MobiDBLite consensus disorder prediction 19 48 - -
Tsu08g01537 745 MobiDBLite consensus disorder prediction 299 364 - -
Tsu08g01537 745 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 745 IPR039727 GO:0006397
Tsu08g01537 745 MobiDBLite consensus disorder prediction 299 315 - -
Tsu08g01537 745 Pfam Arsenite-resistance protein 2 451 645 IPR007042 -
Tsu08g01537 745 MobiDBLite consensus disorder prediction 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01537 Tsu-Chr8 18034770 18041722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01537 67 745 C2H2 Transcription Factor Family AT2G27100 61.823 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01537 - - gmx:100817569 1005.74