Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01525 ATGCTCAGGGAAGATGATTTGTTGTGGAAAAGGGTGTTGGAGGCTAGATATGGTGTTGTTGCATGTTCAAAATTGACGATCGGGCGTAGTAATAATTTCTCCATATGGTGGAAAGATTTGGTGGGATTAGGGAAGGAACGAGGAAGGGTGGGGGATTGGATTCTTGATGTGTTTAAAAAGAAGTTGGGTAATGGAGGTTCCACTAGATTTTGGCTTGATCATTGGGTTGGTGTAGCTCCGTTGAAAGAGGTTTTCCCGCGTCTTTATAGTATTTATTTACAAATGGATCTCACAATTCAAGAAGTGGGAGAATGGGTGAATGGTAAGTGGGTGTGCCATATTAAGTGGAGAAGTATCTTCTTCACTTGGGAGGAGGAATTGACTCGAAATTTATGGAACATAATAGGAGAGGTGAACATCACAAATGTACCCGATTCGTGGTCTTATGCTAGTGGAGGGTTGTATACGatgGCTGCAAAAATAATGGGTATACGCGCAGAATGCCTAGAAGAAAATTTTGAGAATATCAAGCTTCTTAAGGAAGCTATTCTAAATCTTTATTCTCGTGTGGAAGAGAAAGGGAAAATGAATGATCTTCTCGTGCATGCATCGCAATGTCGTTCCCATTGCAGTTTTCCTAATTGTTTCAAAGTGAAGAGCCTCTTCTGCCATGGTATGGACTGCGAAACACGTGCTTCAGGAGGCTGTGTTCTATGCAAGAAAATGTGGTATTTGATTCAATTGCATGCTCGTGCATGCAACAAATCAGAGTGCAATATGCCGCGATGCAGTGATGTCAAAGAACATCTAAGGAGGCAGCAGTGA 825 0.4182 MLREDDLLWKRVLEARYGVVACSKLTIGRSNNFSIWWKDLVGLGKERGRVGDWILDVFKKKLGNGGSTRFWLDHWVGVAPLKEVFPRLYSIYLQMDLTIQEVGEWVNGKWVCHIKWRSIFFTWEEELTRNLWNIIGEVNITNVPDSWSYASGGLYTMAAKIMGIRAECLEENFENIKLLKEAILNLYSRVEEKGKMNDLLVHASQCRSHCSFPNCFKVKSLFCHGMDCETRASGGCVLCKKMWYLIQLHARACNKSECNMPRCSDVKEHLRRQQ 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01525 274 ProSiteProfiles Zinc finger TAZ-type profile. 186 266 IPR000197 -
Tsu08g01525 274 PANTHER CBP/P300-RELATED 189 273 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tsu08g01525 274 SUPERFAMILY TAZ domain 195 272 IPR035898 -
Tsu08g01525 274 Pfam TAZ zinc finger 198 263 IPR000197 -
Tsu08g01525 274 SMART TAZ_2 187 264 IPR000197 -
Tsu08g01525 274 Gene3D TAZ domain 187 274 IPR035898 -
Tsu08g01525 274 PANTHER HISTONE ACETYLTRANSFERASE HAC12 189 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01525 Tsu-Chr8 17860671 17862584 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tsu08g01525 zf-TAZ 2.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01525 K04498 - qsu:112034234 145.976