Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01507 ATGAAATTTGGGTTAGTACATCTTCAAAACATTGTTCTTTCTAAGATATGTGGCGATGGGGATATTAATGTACAAAATGTGAAAGAAGGAATTTCAATGATAAGGCAGAGGCTCTGTCGAAAAAAGGTTTTATTGGTTCTTGAcgatgttaacaaaaaggagcAGTTTAAGGCTATTGCTGGAGCATCTAATTGGTTTGGTCCTGGCAGCAGAGTCATCATCACAACCCGGGACAACAATTTGCTACTAAAGCATTGGGATGGATTTGGAGGAACATATGAGGTAGAGGACTTAAGTGAAAAAGAAGCTCTTGATTTGCTTAGTTGGAATGCTTTCAAGACTGACCAAATAGTTGATCCAAGCTATGCACACGTTTTAAAACGTGTGTTGACCTATGCTTCTAGGCTTCCACTGGCTTTGCAAGTATTAGGCTCCAACTTGTTTGGTAAAAGTATAAACGAGTGGAATGATGCATTAGATCGGTATGAAAAAATTCCTGATCAAGATGTCCAAAGGGTGCTCAAATTAAGCTTTGATTCTTTGGAGGAAGAAGAGCAGAGTATTTTTCTTGATATTGCTTGTTTCTTCAATGGACATAAATTGGAAGACGCAGAAGACATACTCGAGGCTCATTATGCTTCATCTGTGAAATATAGTATAGGAGTGTTGATTGAAAGATCTCTCATAAAGATTGATGATGGTCTTGTGACATTACATGACTTAATACAAGACATGGGTAGAGAAATTGTCCGGCAGGAATCACCGTATGAGCCTGGAAAACGCAGTAGGTTATGGCTTCTCGAAGATGTAGTTGAAGTTTTACAAGAAAATTCGGGTTCTAGTGCAATTGGAAGCTTAGTACTAGATTTCCCCAATGATGGCATAAACTCAAATGTTGACGAAGTAAATTGGGATGGAGAGGCcttaaagaagatgaaaaaccTCAGAACACTTGTTATTAGAAATGGTCGTTTTAACAAAGGCCCAACACACCTTCCCAATAGTTTAAGGGTGTTAGAATGGTGGAGGTATCCTTCAATGTCATTACCAGCTGATTTTCATCCAAACAAACTGGTGATACTCAAGTTACATGAAAGTTTCCTAAGGATAAGTGAACCAATTCAGGCAAGCATCGGTTTCAAAAGCCTGACCGTTTTGGATTTCAGCTACTGTGAACGGATAACTCATATTTCTGATGTATCTGGCCTcccaaatttagaaaaaatatcttttaaacATTGTGAAAGTTTAACTCAAATTCACGAGTCAGTTGGACTTCTGGAAAAACTTAGAATATTGGATGTTAATCATTGCAAGAGGCTCAGGGTTTTTCCGCCCATCAGATTGACCTCTCTTGAACAACTCAATCTTTCACATTGCTCAGTTCTTGAGAGTTTCCCAGAAATATTGGGGAAGATGGAAAACGTAACAAAGCTTTATATAAAGGGAAGTCCTATAAAAGAATTGCCATATTCAATTCAAAACCTTGTACGGCTTAGAAAATTAGAACTAGACACCTGTGGAAAAGTTCGCTTACCAAATAGCATTGTTATGTTGCCCGAACTTAGTTTGATGTGTGTTTCAAAATGCCAAAGGTTGTGGTTTTCCAAACAGGAAAAAGGTGCTGAATTGGAGTCCTCATCAAAGACAGAGCatcttattttgtcatattGCAATATTTCAAATCAGTTACTTCCAATAGTTTTTACTTGGTTTGCCAATGTGAAAGATTTGGATCTATCGGGgaataattttgaaattcttcATGCATGCATCAAAGATTGTCCCTTTCTGAGGAAACTTAATTTGGATGATTGCAAGAAAATAGAAGAAGTTAAAGGGCTTCCATGGACATTAGAATCACTTTCTGCAAACGGATGCACATCCTTGAAATACTTGGACTTCACAGGAGAACGTCCCTCTTTGATAAGAAATCTTATTTTGGATGGTTGCTCATTTTTATATGAAGTCAAAGGGGTTCTGCCAAACTTGGATAGTTTCTCTGCAAAAAACTGCACATCATTGAATAACCAGTCCAGATGGATGATAATGAATCAGAAAACTGTAGAAGCTGGAAACAAGATATTTTCTTTGCCGGGAACAAAGATTCCAGATTGGTTTACTCACCGTATCAGTGGAGAATCAATATCTTTCTGGTTTCGCGGCAAATTCCCAGTAATTTCTCTTTGTCTTGTTATTGGACAAGTGGATGAGAAAGCTATCACCGTGAAGTTTAGCCCGAAAGTGTTTATCAATGGCAATAAACAGTTCCTTGGCAATCGGAAAGTTTACGAGTTCATGATAGGAACAGATCACATACTTTTGTTTGATATAAGCCTGTTAAAGTTTGAGGATAATGAAGATGCCGTCTTTTCTTACAATAACTGGAACCATGTGGTGTTTTCATATGTGGATCATATCAACAACGATGGGGTCCCAATCAAAGTGGTTGCCAAATATAGCGGAATACATGTATCTCAACAAAGGAGTGCTATGGCAAATATTCAATTCACCAATCCCCTGCAGTCAATGCTAAGTGTGAATTTGTATCCAAATTCAATGGAGACACACATAAGAGGCCAGAACACTGCGGATAGACCTCAAAAAGAGCAGACAAAGTTGTTACCTTCCCCCATTCTCTCATCAACCCAACTTCAACCACTGTTTACTGATGTGACTCATGTGAGAAAAGGTCCAGACCCTAAACCAATAGTTCCAGCTAAGAGCTTTTTGGAGGATGTCACAGGAGAAACTTCTAAGAGGCTTTCTGTGGAGGTAGTTCATCCTACTACAATTCCAAATGACCCTCCTGTCATTCAAAGTTGTTCGGAGGGTGATGATGATATTGAACAGGAAGCAGTATACTCTTCTGAACatgaatctgatgaagaatcttCTTACAAGACTGAACCTGAAGAGTTTTCTTACAAGACTGAATCTGAAGAATTTTATTACAAGACTGAATCTGAAGAATCTTCTTACAAGACTGAATCTGAAGGTTCTGACTCAGATGATCCCTTTGACTGTGTTGATAGAAGACTCGATATTAGTGCTGAGGAAACCGTATCTTCTGCATCAAGTTCTGGAGATGCTTCACTTGGATCAATTAGAGAGGCTATTAACTCCTTGGAGCTGTTAATGGTTAAAGACTTATCTGAAGTCTATTCAGATCCTGATGCACATCAACTGTTGGATCTATTGAGTACAAGTAACCACCCAAAGGTGACAATAGAGGTGAAGGAAGCTATTGTGCAGTTCAAGAGAGAGGCTTTCTTATCATTCCAAGAATTCCAATCCACTGTTGAGTCTGTCAACAAACTGAAGGAATTTGAAAGCCATTTGACTAGAATTCAGCAGGAGACTGTGGCAGGCAAGGATCGATGGAAGGACctcaaaaaatcaataaaaaaggTTTCTTCGGCCATCAAAGCTGAAAATAGTAGGAAGAAAGAGTCAGAGGCAGAAATTGCAACTTTAAGAATACAGCTAGCTAAGAAAGAAATGGACCTTGAACAACTTGTGTTGAATATCAAGAATCATGAGGAAACACTCTCAACCTATTCAACAAGTTATGCTTCTCTCAACGAGCAAGCTCGAACACTATTAGAAGAAGCTAATGATCTACTTGCTGCAAGCAGCGGGGTAAAGAATGAGGGTAAAGGTGCCGAAGAGAAGCAGAGGATGCTCAAGTCAACCTGGTCTATTCACCTCACCAACCAGTTCAATcagattaaaaataacattattcaCCTTTTATGA 3759 0.3746 MKFGLVHLQNIVLSKICGDGDINVQNVKEGISMIRQRLCRKKVLLVLDDVNKKEQFKAIAGASNWFGPGSRVIITTRDNNLLLKHWDGFGGTYEVEDLSEKEALDLLSWNAFKTDQIVDPSYAHVLKRVLTYASRLPLALQVLGSNLFGKSINEWNDALDRYEKIPDQDVQRVLKLSFDSLEEEEQSIFLDIACFFNGHKLEDAEDILEAHYASSVKYSIGVLIERSLIKIDDGLVTLHDLIQDMGREIVRQESPYEPGKRSRLWLLEDVVEVLQENSGSSAIGSLVLDFPNDGINSNVDEVNWDGEALKKMKNLRTLVIRNGRFNKGPTHLPNSLRVLEWWRYPSMSLPADFHPNKLVILKLHESFLRISEPIQASIGFKSLTVLDFSYCERITHISDVSGLPNLEKISFKHCESLTQIHESVGLLEKLRILDVNHCKRLRVFPPIRLTSLEQLNLSHCSVLESFPEILGKMENVTKLYIKGSPIKELPYSIQNLVRLRKLELDTCGKVRLPNSIVMLPELSLMCVSKCQRLWFSKQEKGAELESSSKTEHLILSYCNISNQLLPIVFTWFANVKDLDLSGNNFEILHACIKDCPFLRKLNLDDCKKIEEVKGLPWTLESLSANGCTSLKYLDFTGERPSLIRNLILDGCSFLYEVKGVLPNLDSFSAKNCTSLNNQSRWMIMNQKTVEAGNKIFSLPGTKIPDWFTHRISGESISFWFRGKFPVISLCLVIGQVDEKAITVKFSPKVFINGNKQFLGNRKVYEFMIGTDHILLFDISLLKFEDNEDAVFSYNNWNHVVFSYVDHINNDGVPIKVVAKYSGIHVSQQRSAMANIQFTNPLQSMLSVNLYPNSMETHIRGQNTADRPQKEQTKLLPSPILSSTQLQPLFTDVTHVRKGPDPKPIVPAKSFLEDVTGETSKRLSVEVVHPTTIPNDPPVIQSCSEGDDDIEQEAVYSSEHESDEESSYKTEPEEFSYKTESEEFYYKTESEESSYKTESEGSDSDDPFDCVDRRLDISAEETVSSASSSGDASLGSIREAINSLELLMVKDLSEVYSDPDAHQLLDLLSTSNHPKVTIEVKEAIVQFKREAFLSFQEFQSTVESVNKLKEFESHLTRIQQETVAGKDRWKDLKKSIKKVSSAIKAENSRKKESEAEIATLRIQLAKKEMDLEQLVLNIKNHEETLSTYSTSYASLNEQARTLLEEANDLLAASSGVKNEGKGAEEKQRMLKSTWSIHLTNQFNQIKNNIIHLL 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01507 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 192 IPR027417 -
Tsu08g01507 1252 SUPERFAMILY L domain-like 253 655 - -
Tsu08g01507 1252 PRINTS Disease resistance protein signature 133 147 - -
Tsu08g01507 1252 PRINTS Disease resistance protein signature 447 463 - -
Tsu08g01507 1252 PRINTS Disease resistance protein signature 37 51 - -
Tsu08g01507 1252 Pfam NB-ARC domain 8 164 IPR002182 GO:0043531
Tsu08g01507 1252 PANTHER ARCHAEAL ATPASE 642 802 - -
Tsu08g01507 1252 Gene3D Ribonuclease Inhibitor 456 687 IPR032675 -
Tsu08g01507 1252 PANTHER ARCHAEAL ATPASE 2 631 - -
Tsu08g01507 1252 Gene3D Ribonuclease Inhibitor 286 455 IPR032675 -
Tsu08g01507 1252 Gene3D - 1 86 IPR027417 -
Tsu08g01507 1252 MobiDBLite consensus disorder prediction 953 1009 - -
Tsu08g01507 1252 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 642 802 IPR044974 GO:0006952
Tsu08g01507 1252 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 631 IPR044974 GO:0006952
Tsu08g01507 1252 Coils Coil 1135 1211 - -
Tsu08g01507 1252 Gene3D - 97 182 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01507 Tsu-Chr8 17575518 17580315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01507 22 530 WRKY Transcription Factor Family AT4G12020 34.280 1.91e-60 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01507 - - cam:101495757 1293.49